Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SNORD116-20-201ENST00000384529 92 ntBASIC4.2□□□□□ -1.74
ATF4P18848 RNU6-738P-201ENST00000384531 106 ntBASIC4.2□□□□□ -1.74
ATF4P18848 BTF3L4P2-201ENST00000392798 346 ntBASIC4.2□□□□□ -1.74
ATF4P18848 HMGB1P20-201ENST00000402555 677 ntBASIC4.2□□□□□ -1.74
ATF4P18848 RNA5SP38-201ENST00000410750 119 ntBASIC4.2□□□□□ -1.74
ATF4P18848 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.2□□□□□ -1.74
ATF4P18848 BX323845.3-201ENST00000428215 527 ntBASIC4.2□□□□□ -1.74
ATF4P18848 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.2□□□□□ -1.74
ATF4P18848 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.2□□□□□ -1.74
ATF4P18848 RPS26P2-201ENST00000440331 348 ntBASIC4.2□□□□□ -1.74
ATF4P18848 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.2□□□□□ -1.74
ATF4P18848 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.2□□□□□ -1.74
ATF4P18848 AP002884.2-201ENST00000471647 395 ntBASIC4.2□□□□□ -1.74
ATF4P18848 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.2□□□□□ -1.74
ATF4P18848 AC010265.1-201ENST00000513509 211 ntBASIC4.2□□□□□ -1.74
ATF4P18848 AP000676.2-201ENST00000529711 301 ntBASIC4.2□□□□□ -1.74
ATF4P18848 SUB1P3-201ENST00000564581 315 ntBASIC4.2□□□□□ -1.74
ATF4P18848 MIR4505-201ENST00000582238 73 ntBASIC4.2□□□□□ -1.74
ATF4P18848 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.2□□□□□ -1.74
ATF4P18848 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
ATF4P18848 AC020634.1-201ENST00000608701 549 ntBASIC4.2□□□□□ -1.74
ATF4P18848 AC090617.7-201ENST00000623952 126 ntBASIC4.2□□□□□ -1.74
ATF4P18848 AC138627.2-201ENST00000624202 601 ntBASIC4.2□□□□□ -1.74
ATF4P18848 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.2□□□□□ -1.74
ATF4P18848 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATF4P18848 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATF4P18848 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATF4P18848 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
ATF4P18848 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATF4P18848 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.2□□□□□ -1.74
ATF4P18848 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATF4P18848 MTND5P9-201ENST00000503854 1755 ntBASIC4.19□□□□□ -1.74
ATF4P18848 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
ATF4P18848 AL359922.3-201ENST00000624779 1670 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ATF4P18848 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATF4P18848 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATF4P18848 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.19□□□□□ -1.74
ATF4P18848 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATF4P18848 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATF4P18848 RNU6-942P-201ENST00000363002 107 ntBASIC4.19□□□□□ -1.74
ATF4P18848 RNU6-198P-201ENST00000384258 104 ntBASIC4.19□□□□□ -1.74
ATF4P18848 MIR93-201ENST00000385024 80 ntBASIC4.19□□□□□ -1.74
ATF4P18848 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ATF4P18848 MCFD2P1-201ENST00000417812 300 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AC243428.1-201ENST00000421099 264 ntBASIC4.19□□□□□ -1.74
ATF4P18848 RPL36AP39-201ENST00000445859 318 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AC010099.1-201ENST00000455434 375 ntBASIC4.19□□□□□ -1.74
ATF4P18848 RN7SL41P-201ENST00000476144 297 ntBASIC4.19□□□□□ -1.74
ATF4P18848 FO393415.2-201ENST00000480085 343 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AC022133.1-201ENST00000490961 571 ntBASIC4.19□□□□□ -1.74
ATF4P18848 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.19□□□□□ -1.74
ATF4P18848 AC146944.2-203ENST00000502493 354 ntBASIC4.19□□□□□ -1.74
ATF4P18848 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.19□□□□□ -1.74
ATF4P18848 AC116655.1-201ENST00000508324 901 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AC139495.1-202ENST00000513164 354 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AC004980.4-201ENST00000513375 203 ntBASIC4.19□□□□□ -1.74
ATF4P18848 BX510359.5-201ENST00000515651 304 ntBASIC4.19□□□□□ -1.74
ATF4P18848 RNU6-615P-201ENST00000516065 106 ntBASIC4.19□□□□□ -1.74
ATF4P18848 RNA5SP392-201ENST00000516905 112 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AC022360.1-201ENST00000521058 340 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.19□□□□□ -1.74
ATF4P18848 IGKV2-18-201ENST00000522607 343 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.19□□□□□ -1.74
ATF4P18848 CBX3P8-201ENST00000532412 525 ntBASIC4.19□□□□□ -1.74
ATF4P18848 CR383656.8-201ENST00000549046 145 ntBASIC4.19□□□□□ -1.74
ATF4P18848 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.19□□□□□ -1.74
ATF4P18848 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.19□□□□□ -1.74
ATF4P18848 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.19□□□□□ -1.74
ATF4P18848 ATP5J2P6-201ENST00000565203 266 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AC015720.2-201ENST00000567709 334 ntBASIC4.19□□□□□ -1.74
ATF4P18848 MTND6P33-201ENST00000571794 183 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AP005403.1-201ENST00000579720 229 ntBASIC4.19□□□□□ -1.74
ATF4P18848 SNORD95-201ENST00000579879 68 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AC023575.1-201ENST00000580510 358 ntBASIC4.19□□□□□ -1.74
ATF4P18848 HMGN2P15-201ENST00000585707 270 ntBASIC4.19□□□□□ -1.74
ATF4P18848 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.19□□□□□ -1.74
ATF4P18848 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.19□□□□□ -1.74
ATF4P18848 AC006157.1-201ENST00000611750 366 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.19□□□□□ -1.74
ATF4P18848 AC090510.2-201ENST00000617465 629 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AP005431.1-201ENST00000618479 319 ntBASIC4.19□□□□□ -1.74
ATF4P18848 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.19□□□□□ -1.74
ATF4P18848 MIR8080-201ENST00000622224 89 ntBASIC4.19□□□□□ -1.74
ATF4P18848 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.19□□□□□ -1.74
ATF4P18848 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.19□□□□□ -1.74
ATF4P18848 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.19□□□□□ -1.74
ATF4P18848 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATF4P18848 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ATF4P18848 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATF4P18848 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATF4P18848 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ATF4P18848 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATF4P18848 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
ATF4P18848 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.18□□□□□ -1.74
ATF4P18848 RNY1P16-201ENST00000363063 111 ntBASIC4.18□□□□□ -1.74
ATF4P18848 RNU1-19P-201ENST00000363306 165 ntBASIC4.18□□□□□ -1.74
ATF4P18848 RHOT1P2-201ENST00000366423 333 ntBASIC4.18□□□□□ -1.74
ATF4P18848 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
ATF4P18848 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms