Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
TOP1P11387 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TOP1P11387 AC010329.5-201ENST00000623497 2174 ntBASIC2.64□□□□□ -1.99
TOP1P11387 AC004944.1-201ENST00000517807 3059 ntBASIC2.64□□□□□ -1.99
TOP1P11387 RNU5E-8P-201ENST00000363502 116 ntBASIC2.64□□□□□ -1.99
TOP1P11387 RNU1-91P-201ENST00000364746 163 ntBASIC2.64□□□□□ -1.99
TOP1P11387 SNORA80E-201ENST00000384744 137 ntBASIC2.64□□□□□ -1.99
TOP1P11387 AF228730.1-201ENST00000397972 663 ntBASIC2.64□□□□□ -1.99
TOP1P11387 DHFRP6-201ENST00000401776 268 ntBASIC2.64□□□□□ -1.99
TOP1P11387 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.64□□□□□ -1.99
TOP1P11387 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.64□□□□□ -1.99
TOP1P11387 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.64□□□□□ -1.99
TOP1P11387 ZNF863P-201ENST00000426746 417 ntBASIC2.64□□□□□ -1.99
TOP1P11387 MTND2P20-201ENST00000440805 661 ntBASIC2.64□□□□□ -1.99
TOP1P11387 MTND3P1-201ENST00000441336 220 ntBASIC2.64□□□□□ -1.99
TOP1P11387 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.64□□□□□ -1.99
TOP1P11387 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.64□□□□□ -1.99
TOP1P11387 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.64□□□□□ -1.99
TOP1P11387 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.64□□□□□ -1.99
TOP1P11387 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.64□□□□□ -1.99
TOP1P11387 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.64□□□□□ -1.99
TOP1P11387 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.64□□□□□ -1.99
TOP1P11387 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.64□□□□□ -1.99
TOP1P11387 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.64□□□□□ -1.99
TOP1P11387 PRELID2P1-201ENST00000552837 301 ntBASIC2.64□□□□□ -1.99
TOP1P11387 AC026464.5-201ENST00000562497 722 ntBASIC2.64□□□□□ -1.99
TOP1P11387 MIR1273D-201ENST00000577266 86 ntBASIC2.64□□□□□ -1.99
TOP1P11387 CLIC4P2-201ENST00000601934 717 ntBASIC2.64□□□□□ -1.99
TOP1P11387 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.64□□□□□ -1.99
TOP1P11387 AL158042.1-201ENST00000605338 460 ntBASIC2.64□□□□□ -1.99
TOP1P11387 AC107294.1-201ENST00000609524 467 ntBASIC2.64□□□□□ -1.99
TOP1P11387 TUSC7.1-201ENST00000610969 165 ntBASIC2.64□□□□□ -1.99
TOP1P11387 AC243773.3-201ENST00000613270 256 ntBASIC2.64□□□□□ -1.99
TOP1P11387 HMGB1P24-202ENST00000615653 685 ntBASIC2.64□□□□□ -1.99
TOP1P11387 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
TOP1P11387 CDR1-202ENST00000625883 1485 ntBASIC2.64□□□□□ -1.99
TOP1P11387 AC005336.3-201ENST00000623833 2679 ntBASIC2.64□□□□□ -1.99
TOP1P11387 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TOP1P11387 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
TOP1P11387 Y_RNA.311-201ENST00000365068 96 ntBASIC2.63□□□□□ -1.99
TOP1P11387 RNU1-52P-201ENST00000384190 164 ntBASIC2.63□□□□□ -1.99
TOP1P11387 MIR221-201ENST00000385135 110 ntBASIC2.63□□□□□ -1.99
TOP1P11387 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TOP1P11387 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.63□□□□□ -1.99
TOP1P11387 RN7SKP192-201ENST00000411291 327 ntBASIC2.63□□□□□ -1.99
TOP1P11387 TPMTP3-201ENST00000411928 735 ntBASIC2.63□□□□□ -1.99
TOP1P11387 AL139421.1-201ENST00000423010 169 ntBASIC2.63□□□□□ -1.99
TOP1P11387 AL139415.2-201ENST00000431968 163 ntBASIC2.63□□□□□ -1.99
TOP1P11387 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.63□□□□□ -1.99
TOP1P11387 AL606662.1-201ENST00000445763 553 ntBASIC2.63□□□□□ -1.99
TOP1P11387 SNORD121B-201ENST00000458838 81 ntBASIC2.63□□□□□ -1.99
TOP1P11387 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.63□□□□□ -1.99
TOP1P11387 RPL7P18-201ENST00000478965 734 ntBASIC2.63□□□□□ -1.99
TOP1P11387 AC004263.1-201ENST00000479327 332 ntBASIC2.63□□□□□ -1.99
TOP1P11387 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.63□□□□□ -1.99
TOP1P11387 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TOP1P11387 AC010587.2-201ENST00000511727 448 ntBASIC2.63□□□□□ -1.99
TOP1P11387 AC109445.1-201ENST00000512356 383 ntBASIC2.63□□□□□ -1.99
TOP1P11387 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.63□□□□□ -1.99
TOP1P11387 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.63□□□□□ -1.99
TOP1P11387 SLC2A13P1-201ENST00000531560 322 ntBASIC2.63□□□□□ -1.99
TOP1P11387 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
TOP1P11387 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.63□□□□□ -1.99
TOP1P11387 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.63□□□□□ -1.99
TOP1P11387 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.63□□□□□ -1.99
TOP1P11387 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.63□□□□□ -1.99
TOP1P11387 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.63□□□□□ -1.99
TOP1P11387 AL603758.1-201ENST00000618654 241 ntBASIC2.63□□□□□ -1.99
TOP1P11387 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.63□□□□□ -1.99
TOP1P11387 AC097655.1-201ENST00000635075 318 ntBASIC2.63□□□□□ -1.99
TOP1P11387 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.63□□□□□ -1.99
TOP1P11387 AC009902.3-201ENST00000606235 2172 ntBASIC2.63□□□□□ -1.99
TOP1P11387 AC104454.1-201ENST00000421341 1401 ntBASIC2.62□□□□□ -1.99
TOP1P11387 SNORA38-201ENST00000363946 132 ntBASIC2.62□□□□□ -1.99
TOP1P11387 RNU6-140P-201ENST00000384566 108 ntBASIC2.62□□□□□ -1.99
TOP1P11387 AL109755.1-201ENST00000401791 649 ntBASIC2.62□□□□□ -1.99
TOP1P11387 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.62□□□□□ -1.99
TOP1P11387 PIGPP2-201ENST00000411569 458 ntBASIC2.62□□□□□ -1.99
TOP1P11387 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.62□□□□□ -1.99
TOP1P11387 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.62□□□□□ -1.99
TOP1P11387 OOSP1P1-201ENST00000423265 274 ntBASIC2.62□□□□□ -1.99
TOP1P11387 MTND4P6-201ENST00000438297 472 ntBASIC2.62□□□□□ -1.99
TOP1P11387 AL008629.1-201ENST00000438615 184 ntBASIC2.62□□□□□ -1.99
TOP1P11387 FAM103A2P-201ENST00000444122 354 ntBASIC2.62□□□□□ -1.99
TOP1P11387 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.62□□□□□ -1.99
TOP1P11387 AL353705.4-201ENST00000449661 238 ntBASIC2.62□□□□□ -1.99
TOP1P11387 snoU13.8-201ENST00000458890 104 ntBASIC2.62□□□□□ -1.99
TOP1P11387 RPS20P22-201ENST00000473700 357 ntBASIC2.62□□□□□ -1.99
TOP1P11387 MRPL42P6-201ENST00000486397 371 ntBASIC2.62□□□□□ -1.99
TOP1P11387 AC135721.1-201ENST00000497954 479 ntBASIC2.62□□□□□ -1.99
TOP1P11387 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
TOP1P11387 AC093677.1-201ENST00000514414 678 ntBASIC2.62□□□□□ -1.99
TOP1P11387 AC022447.1-201ENST00000515358 464 ntBASIC2.62□□□□□ -1.99
TOP1P11387 RNU5F-8P-201ENST00000515941 111 ntBASIC2.62□□□□□ -1.99
TOP1P11387 SCARNA17.1-201ENST00000516211 143 ntBASIC2.62□□□□□ -1.99
TOP1P11387 SCARNA17.2-201ENST00000516334 143 ntBASIC2.62□□□□□ -1.99
TOP1P11387 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.62□□□□□ -1.99
TOP1P11387 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.62□□□□□ -1.99
TOP1P11387 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.62□□□□□ -1.99
TOP1P11387 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms