Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AL158063.1-201ENST00000615349 536 ntBASIC3.43□□□□□ -1.86
CD4P01730 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.43□□□□□ -1.86
CD4P01730 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.42□□□□□ -1.86
CD4P01730 ZNF519P1-201ENST00000449011 1626 ntBASIC3.42□□□□□ -1.86
CD4P01730 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CD4P01730 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CD4P01730 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CD4P01730 RPS3AP36-201ENST00000398190 775 ntBASIC3.42□□□□□ -1.86
CD4P01730 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.42□□□□□ -1.86
CD4P01730 AC010153.1-201ENST00000432862 727 ntBASIC3.42□□□□□ -1.86
CD4P01730 MTND4P25-201ENST00000441039 533 ntBASIC3.42□□□□□ -1.86
CD4P01730 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.42□□□□□ -1.86
CD4P01730 RPL12P25-201ENST00000455592 494 ntBASIC3.42□□□□□ -1.86
CD4P01730 HMGN1P18-201ENST00000457642 277 ntBASIC3.42□□□□□ -1.86
CD4P01730 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.42□□□□□ -1.86
CD4P01730 AC010401.1-201ENST00000463867 348 ntBASIC3.42□□□□□ -1.86
CD4P01730 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.42□□□□□ -1.86
CD4P01730 RN7SKP132-201ENST00000516001 208 ntBASIC3.42□□□□□ -1.86
CD4P01730 RNA5SP367-201ENST00000516557 118 ntBASIC3.42□□□□□ -1.86
CD4P01730 Vault.3-201ENST00000516676 95 ntBASIC3.42□□□□□ -1.86
CD4P01730 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.42□□□□□ -1.86
CD4P01730 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CD4P01730 BNIP3P9-201ENST00000603714 553 ntBASIC3.42□□□□□ -1.86
CD4P01730 AC007363.1-201ENST00000604736 620 ntBASIC3.42□□□□□ -1.86
CD4P01730 AC007619.2-201ENST00000605743 379 ntBASIC3.42□□□□□ -1.86
CD4P01730 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.42□□□□□ -1.86
CD4P01730 AC109347.2-201ENST00000610220 349 ntBASIC3.42□□□□□ -1.86
CD4P01730 AC013412.1-201ENST00000610687 192 ntBASIC3.42□□□□□ -1.86
CD4P01730 DUSP12P1-201ENST00000612874 516 ntBASIC3.42□□□□□ -1.86
CD4P01730 MTND5P42-201ENST00000637720 498 ntBASIC3.42□□□□□ -1.86
CD4P01730 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CD4P01730 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CD4P01730 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CD4P01730 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CD4P01730 RNU1-75P-201ENST00000347264 129 ntBASIC3.41□□□□□ -1.86
CD4P01730 Y_RNA.77-201ENST00000362962 107 ntBASIC3.41□□□□□ -1.86
CD4P01730 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CD4P01730 AP002088.1-201ENST00000382740 395 ntBASIC3.41□□□□□ -1.86
CD4P01730 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.41□□□□□ -1.86
CD4P01730 MED13P1-201ENST00000428342 171 ntBASIC3.41□□□□□ -1.86
CD4P01730 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.41□□□□□ -1.86
CD4P01730 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.41□□□□□ -1.86
CD4P01730 MTND2P4-201ENST00000445034 1004 ntBASIC3.41□□□□□ -1.86
CD4P01730 ST13P20-201ENST00000447996 1065 ntBASIC3.41□□□□□ -1.86
CD4P01730 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.41□□□□□ -1.86
CD4P01730 RPL31P3-201ENST00000458430 332 ntBASIC3.41□□□□□ -1.86
CD4P01730 RPL7P5-201ENST00000471472 736 ntBASIC3.41□□□□□ -1.86
CD4P01730 AC092185.1-201ENST00000491371 97 ntBASIC3.41□□□□□ -1.86
CD4P01730 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.41□□□□□ -1.86
CD4P01730 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.41□□□□□ -1.86
CD4P01730 Y_RNA.695-201ENST00000516715 107 ntBASIC3.41□□□□□ -1.86
CD4P01730 RNA5SP471-201ENST00000516971 106 ntBASIC3.41□□□□□ -1.86
CD4P01730 RNU2-46P-201ENST00000517038 113 ntBASIC3.41□□□□□ -1.86
CD4P01730 RNA5SP165-201ENST00000517142 115 ntBASIC3.41□□□□□ -1.86
CD4P01730 AC022634.1-201ENST00000520765 532 ntBASIC3.41□□□□□ -1.86
CD4P01730 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.41□□□□□ -1.86
CD4P01730 TRAV37-201ENST00000553906 342 ntBASIC3.41□□□□□ -1.86
CD4P01730 AL359212.1-201ENST00000556608 614 ntBASIC3.41□□□□□ -1.86
CD4P01730 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.41□□□□□ -1.86
CD4P01730 AC137800.2-201ENST00000574375 120 ntBASIC3.41□□□□□ -1.86
CD4P01730 AC005951.1-201ENST00000576706 485 ntBASIC3.41□□□□□ -1.86
CD4P01730 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.41□□□□□ -1.86
CD4P01730 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.41□□□□□ -1.86
CD4P01730 AC005498.1-201ENST00000592125 465 ntBASIC3.41□□□□□ -1.86
CD4P01730 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.41□□□□□ -1.86
CD4P01730 Z69908.1-201ENST00000622603 247 ntBASIC3.41□□□□□ -1.86
CD4P01730 AC091903.1-201ENST00000624322 454 ntBASIC3.41□□□□□ -1.86
CD4P01730 AC110079.1-202ENST00000635213 138 ntBASIC3.41□□□□□ -1.86
CD4P01730 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CD4P01730 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CD4P01730 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CD4P01730 CR848007.1-201ENST00000442354 1699 ntBASIC3.4□□□□□ -1.86
CD4P01730 MIR22-201ENST00000362190 85 ntBASIC3.4□□□□□ -1.87
CD4P01730 RNU6-884P-201ENST00000363889 107 ntBASIC3.4□□□□□ -1.87
CD4P01730 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD4P01730 SMIM11P1-201ENST00000369586 178 ntBASIC3.4□□□□□ -1.87
CD4P01730 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD4P01730 SNORA20.2-201ENST00000383922 131 ntBASIC3.4□□□□□ -1.87
CD4P01730 RNU6-190P-201ENST00000384154 102 ntBASIC3.4□□□□□ -1.87
CD4P01730 RNU6-14P-201ENST00000384630 106 ntBASIC3.4□□□□□ -1.87
CD4P01730 MIR301A-201ENST00000385261 86 ntBASIC3.4□□□□□ -1.87
CD4P01730 RNA5SP31-201ENST00000411144 127 ntBASIC3.4□□□□□ -1.87
CD4P01730 AC127391.1-201ENST00000411737 98 ntBASIC3.4□□□□□ -1.87
CD4P01730 AC245291.1-201ENST00000419501 328 ntBASIC3.4□□□□□ -1.87
CD4P01730 AL645937.1-202ENST00000421799 937 ntBASIC3.4□□□□□ -1.87
CD4P01730 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD4P01730 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.4□□□□□ -1.87
CD4P01730 RPL36AP53-201ENST00000432891 316 ntBASIC3.4□□□□□ -1.87
CD4P01730 BX679664.1-201ENST00000434429 253 ntBASIC3.4□□□□□ -1.87
CD4P01730 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.4□□□□□ -1.87
CD4P01730 MTND1P27-201ENST00000451117 902 ntBASIC3.4□□□□□ -1.87
CD4P01730 CECR9-201ENST00000453421 199 ntBASIC3.4□□□□□ -1.87
CD4P01730 AC006539.3-201ENST00000454258 129 ntBASIC3.4□□□□□ -1.87
CD4P01730 AC128713.1-201ENST00000471495 306 ntBASIC3.4□□□□□ -1.87
CD4P01730 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.4□□□□□ -1.87
CD4P01730 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.4□□□□□ -1.87
CD4P01730 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.4□□□□□ -1.87
CD4P01730 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CD4P01730 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CD4P01730 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms