Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC010733.2-201ENST00000589496 5702 ntBASIC3.25□□□□□ -1.89
LDLRP01130 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.25□□□□□ -1.89
LDLRP01130 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LDLRP01130 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.25□□□□□ -1.89
LDLRP01130 MFSD8-233ENST00000641482 4860 ntBASIC3.25□□□□□ -1.89
LDLRP01130 MTND4P12-201ENST00000498999 1377 ntBASIC3.25□□□□□ -1.89
LDLRP01130 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 AC017071.1-201ENST00000564407 2204 ntBASIC3.24□□□□□ -1.89
LDLRP01130 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LDLRP01130 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 CBX3P1-201ENST00000325243 554 ntBASIC3.24□□□□□ -1.89
LDLRP01130 U3.11-201ENST00000364476 212 ntBASIC3.24□□□□□ -1.89
LDLRP01130 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDLRP01130 RNU1-39P-201ENST00000383897 165 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AL109755.1-201ENST00000401791 649 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.24□□□□□ -1.89
LDLRP01130 C1DP2-201ENST00000418167 426 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.24□□□□□ -1.89
LDLRP01130 USP9YP36-201ENST00000424581 829 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AC104850.1-201ENST00000435940 476 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 AL162389.1-201ENST00000449233 177 ntBASIC3.24□□□□□ -1.89
LDLRP01130 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 AP000852.1-201ENST00000472460 573 ntBASIC3.24□□□□□ -1.89
LDLRP01130 HMGN2P13-201ENST00000476476 274 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AC025518.1-201ENST00000479856 347 ntBASIC3.24□□□□□ -1.89
LDLRP01130 RPS29P25-201ENST00000481709 171 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.24□□□□□ -1.89
LDLRP01130 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 RNU6-64P-201ENST00000517119 105 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.24□□□□□ -1.89
LDLRP01130 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.24□□□□□ -1.89
LDLRP01130 AC123904.3-201ENST00000547218 814 ntBASIC3.24□□□□□ -1.89
LDLRP01130 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 AF038458.1-201ENST00000588406 262 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AC008536.2-201ENST00000607284 349 ntBASIC3.24□□□□□ -1.89
LDLRP01130 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 AC107294.3-201ENST00000609211 526 ntBASIC3.24□□□□□ -1.89
LDLRP01130 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDLRP01130 AL121757.2-201ENST00000611223 313 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.24□□□□□ -1.89
LDLRP01130 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.24□□□□□ -1.89
LDLRP01130 AC110774.1-201ENST00000623567 2018 ntBASIC3.24□□□□□ -1.89
LDLRP01130 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.24□□□□□ -1.89
LDLRP01130 AL353743.1-202ENST00000431724 1695 ntBASIC3.24□□□□□ -1.89
LDLRP01130 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
LDLRP01130 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LDLRP01130 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LDLRP01130 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LDLRP01130 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LDLRP01130 OR1S2-201ENST00000302592 978 ntBASIC3.23□□□□□ -1.89
LDLRP01130 MIR148B-201ENST00000362252 99 ntBASIC3.23□□□□□ -1.89
LDLRP01130 RNU5E-1-201ENST00000362477 120 ntBASIC3.23□□□□□ -1.89
LDLRP01130 RNU6-223P-201ENST00000362830 107 ntBASIC3.23□□□□□ -1.89
LDLRP01130 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.23□□□□□ -1.89
LDLRP01130 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
LDLRP01130 Y_RNA.402-201ENST00000383972 102 ntBASIC3.23□□□□□ -1.89
LDLRP01130 RNU6-876P-201ENST00000391295 104 ntBASIC3.23□□□□□ -1.89
LDLRP01130 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.23□□□□□ -1.89
LDLRP01130 GSTA9P-201ENST00000406231 611 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AL354719.1-201ENST00000406535 843 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AC127391.1-201ENST00000411737 98 ntBASIC3.23□□□□□ -1.89
LDLRP01130 RPL21P24-201ENST00000413752 448 ntBASIC3.23□□□□□ -1.89
LDLRP01130 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.23□□□□□ -1.89
LDLRP01130 AC012498.1-201ENST00000424037 437 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.23□□□□□ -1.89
LDLRP01130 TRIAP1P1-201ENST00000427062 225 ntBASIC3.23□□□□□ -1.89
LDLRP01130 ELOCP14-201ENST00000428070 331 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.23□□□□□ -1.89
LDLRP01130 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.23□□□□□ -1.89
LDLRP01130 AL358934.1-201ENST00000432346 324 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AC009961.2-201ENST00000435771 251 ntBASIC3.23□□□□□ -1.89
LDLRP01130 ARPC3P1-201ENST00000437218 533 ntBASIC3.23□□□□□ -1.89
LDLRP01130 ELOCP7-201ENST00000439968 331 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AC008264.1-201ENST00000447612 367 ntBASIC3.23□□□□□ -1.89
LDLRP01130 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.23□□□□□ -1.89
LDLRP01130 MTND1P11-201ENST00000456661 876 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AP002884.2-201ENST00000471647 395 ntBASIC3.23□□□□□ -1.89
LDLRP01130 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.23□□□□□ -1.89
LDLRP01130 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LDLRP01130 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.23□□□□□ -1.89
LDLRP01130 RNU6-390P-201ENST00000516259 103 ntBASIC3.23□□□□□ -1.89
LDLRP01130 RNU6-840P-201ENST00000517275 65 ntBASIC3.23□□□□□ -1.89
LDLRP01130 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.23□□□□□ -1.89
LDLRP01130 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.23□□□□□ -1.89
LDLRP01130 ERHP1-201ENST00000523006 310 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.23□□□□□ -1.89
LDLRP01130 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.23□□□□□ -1.89
LDLRP01130 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.23□□□□□ -1.89
LDLRP01130 MIR3682-201ENST00000581338 84 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.23□□□□□ -1.89
LDLRP01130 AC106900.2-201ENST00000604994 317 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AC008277.2-201ENST00000605196 797 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms