Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.7□□□□□ -1.66
CPNE3O75131 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CPNE3O75131 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CPNE3O75131 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.69□□□□□ -1.66
CPNE3O75131 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CPNE3O75131 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.69□□□□□ -1.66
CPNE3O75131 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CPNE3O75131 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CPNE3O75131 RNU6-1279P-201ENST00000383917 103 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 SNORA56-201ENST00000383966 129 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.69□□□□□ -1.66
CPNE3O75131 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.69□□□□□ -1.66
CPNE3O75131 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CPNE3O75131 RPL21P66-201ENST00000426566 466 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 ARL5AP4-201ENST00000430731 512 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 Z82210.1-201ENST00000440037 231 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.69□□□□□ -1.66
CPNE3O75131 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CPNE3O75131 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.69□□□□□ -1.66
CPNE3O75131 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.69□□□□□ -1.66
CPNE3O75131 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.69□□□□□ -1.66
CPNE3O75131 Vault.1-201ENST00000516474 102 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 AC109329.1-201ENST00000518744 317 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.69□□□□□ -1.66
CPNE3O75131 AL590705.4-201ENST00000532209 134 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.69□□□□□ -1.66
CPNE3O75131 AC136601.2-201ENST00000604356 474 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.69□□□□□ -1.66
CPNE3O75131 AC005046.1-201ENST00000608515 625 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 AC130454.1-201ENST00000622948 401 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 AC090617.7-201ENST00000623952 126 ntBASIC4.69□□□□□ -1.66
CPNE3O75131 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
CPNE3O75131 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.69□□□□□ -1.66
CPNE3O75131 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CPNE3O75131 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CPNE3O75131 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.69□□□□□ -1.66
CPNE3O75131 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.69□□□□□ -1.66
CPNE3O75131 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
CPNE3O75131 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CPNE3O75131 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CPNE3O75131 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CPNE3O75131 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CPNE3O75131 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CPNE3O75131 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
CPNE3O75131 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CPNE3O75131 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CPNE3O75131 AP001273.1-201ENST00000624493 3152 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CPNE3O75131 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CPNE3O75131 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.68□□□□□ -1.66
CPNE3O75131 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CPNE3O75131 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CPNE3O75131 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CPNE3O75131 RNU6-398P-201ENST00000384143 109 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 RNU6-1026P-201ENST00000384465 108 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CPNE3O75131 RN7SKP100-201ENST00000411258 284 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 RPL17P36-201ENST00000420302 549 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.68□□□□□ -1.66
CPNE3O75131 SNRPEP9-201ENST00000436794 238 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.68□□□□□ -1.66
CPNE3O75131 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.68□□□□□ -1.66
CPNE3O75131 AC073264.2-201ENST00000448886 166 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 AC079354.2-201ENST00000453523 154 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 AURKAPS2-201ENST00000454983 333 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.68□□□□□ -1.66
CPNE3O75131 IGLV2-34-201ENST00000490007 283 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.68□□□□□ -1.66
CPNE3O75131 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.68□□□□□ -1.66
CPNE3O75131 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.68□□□□□ -1.66
CPNE3O75131 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.68□□□□□ -1.66
CPNE3O75131 AC023575.1-201ENST00000580510 358 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 AC006557.5-201ENST00000603126 811 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 CR381572.2-201ENST00000624852 397 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 AC112200.1-201ENST00000625015 234 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.68□□□□□ -1.66
CPNE3O75131 U6.99-201ENST00000637524 83 ntBASIC4.68□□□□□ -1.66
CPNE3O75131 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CPNE3O75131 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CPNE3O75131 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CPNE3O75131 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CPNE3O75131 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CPNE3O75131 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CPNE3O75131 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.68□□□□□ -1.66
CPNE3O75131 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.68□□□□□ -1.66
CPNE3O75131 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.68□□□□□ -1.66
CPNE3O75131 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.67□□□□□ -1.66
CPNE3O75131 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.67□□□□□ -1.66
CPNE3O75131 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.67□□□□□ -1.66
CPNE3O75131 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CPNE3O75131 RNU6-227P-201ENST00000362865 103 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.67□□□□□ -1.66
CPNE3O75131 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CPNE3O75131 RPS16P5-201ENST00000406501 404 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 RNU2-38P-201ENST00000410856 79 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.67□□□□□ -1.66
CPNE3O75131 AL356981.1-201ENST00000454879 684 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms