Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB2O43679 MTND4P25-201ENST00000441039 533 ntBASIC3.35□□□□□ -1.87
LDB2O43679 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB2O43679 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB2O43679 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB2O43679 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.35□□□□□ -1.87
LDB2O43679 AC010285.1-201ENST00000470580 392 ntBASIC3.35□□□□□ -1.87
LDB2O43679 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB2O43679 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.35□□□□□ -1.87
LDB2O43679 RPL32P34-201ENST00000486380 400 ntBASIC3.35□□□□□ -1.87
LDB2O43679 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB2O43679 HMGB1P22-201ENST00000505315 124 ntBASIC3.35□□□□□ -1.87
LDB2O43679 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.35□□□□□ -1.87
LDB2O43679 SNORA31.22-201ENST00000517204 135 ntBASIC3.35□□□□□ -1.87
LDB2O43679 ERHP1-201ENST00000523006 310 ntBASIC3.35□□□□□ -1.87
LDB2O43679 OR5AL2P-201ENST00000532185 920 ntBASIC3.35□□□□□ -1.87
LDB2O43679 AC015917.1-201ENST00000579654 510 ntBASIC3.35□□□□□ -1.87
LDB2O43679 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.35□□□□□ -1.87
LDB2O43679 AP001486.3-201ENST00000615334 372 ntBASIC3.35□□□□□ -1.87
LDB2O43679 AL355365.1-201ENST00000616480 294 ntBASIC3.35□□□□□ -1.87
LDB2O43679 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LDB2O43679 AC091953.5-201ENST00000622919 233 ntBASIC3.35□□□□□ -1.87
LDB2O43679 PWAR6-201ENST00000552334 4618 ntBASIC3.35□□□□□ -1.87
LDB2O43679 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB2O43679 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB2O43679 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB2O43679 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB2O43679 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LDB2O43679 RIOK3P1-201ENST00000418778 1528 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AC073346.2-201ENST00000624724 2058 ntBASIC3.34□□□□□ -1.87
LDB2O43679 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB2O43679 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB2O43679 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
LDB2O43679 AL139276.1-201ENST00000311910 1001 ntBASIC3.34□□□□□ -1.87
LDB2O43679 RNU1-70P-201ENST00000362618 164 ntBASIC3.34□□□□□ -1.87
LDB2O43679 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LDB2O43679 PTMAP5-201ENST00000393073 333 ntBASIC3.34□□□□□ -1.87
LDB2O43679 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB2O43679 TOMM22P1-201ENST00000418578 312 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB2O43679 MTCYBP8-201ENST00000422855 651 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AC012498.1-201ENST00000424037 437 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AC079780.1-201ENST00000428259 207 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AC024082.2-201ENST00000434771 238 ntBASIC3.34□□□□□ -1.87
LDB2O43679 RPL26P6-201ENST00000440913 438 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AL671855.1-201ENST00000446875 1203 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.34□□□□□ -1.87
LDB2O43679 RPS24P6-201ENST00000452670 400 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.34□□□□□ -1.87
LDB2O43679 RPS29P15-201ENST00000458329 171 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB2O43679 AC008155.2-201ENST00000464337 397 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB2O43679 RPL38P4-201ENST00000502376 214 ntBASIC3.34□□□□□ -1.87
LDB2O43679 VN1R104P-201ENST00000505115 1009 ntBASIC3.34□□□□□ -1.87
LDB2O43679 MLLT10P2-201ENST00000506434 249 ntBASIC3.34□□□□□ -1.87
LDB2O43679 KLHL2P1-201ENST00000508691 521 ntBASIC3.34□□□□□ -1.87
LDB2O43679 RNU6-390P-201ENST00000516259 103 ntBASIC3.34□□□□□ -1.87
LDB2O43679 RNA5SP503-201ENST00000517047 117 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.34□□□□□ -1.87
LDB2O43679 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LDB2O43679 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LDB2O43679 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB2O43679 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.34□□□□□ -1.87
LDB2O43679 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB2O43679 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.34□□□□□ -1.87
LDB2O43679 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB2O43679 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB2O43679 AC024619.4-201ENST00000580924 316 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AP001029.3-201ENST00000588063 596 ntBASIC3.34□□□□□ -1.87
LDB2O43679 BNIP3P10-201ENST00000605360 577 ntBASIC3.34□□□□□ -1.87
LDB2O43679 uc_338.11-201ENST00000619132 160 ntBASIC3.34□□□□□ -1.87
LDB2O43679 AC006504.8-201ENST00000621046 635 ntBASIC3.34□□□□□ -1.87
LDB2O43679 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LDB2O43679 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
LDB2O43679 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.88
LDB2O43679 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB2O43679 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LDB2O43679 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDB2O43679 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB2O43679 NACAP2-201ENST00000318548 624 ntBASIC3.33□□□□□ -1.88
LDB2O43679 Y_RNA.157-201ENST00000363638 102 ntBASIC3.33□□□□□ -1.88
LDB2O43679 RNU6-525P-201ENST00000363685 104 ntBASIC3.33□□□□□ -1.88
LDB2O43679 RNU6-173P-201ENST00000364215 104 ntBASIC3.33□□□□□ -1.88
LDB2O43679 SNORA51.2-201ENST00000364595 132 ntBASIC3.33□□□□□ -1.88
LDB2O43679 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDB2O43679 SNORA24.1-201ENST00000384401 135 ntBASIC3.33□□□□□ -1.88
LDB2O43679 MIR483-201ENST00000385070 76 ntBASIC3.33□□□□□ -1.88
LDB2O43679 NDUFS5P1-201ENST00000405668 289 ntBASIC3.33□□□□□ -1.88
LDB2O43679 BX323014.1-201ENST00000412876 237 ntBASIC3.33□□□□□ -1.88
LDB2O43679 AC093106.2-201ENST00000428212 385 ntBASIC3.33□□□□□ -1.88
LDB2O43679 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.33□□□□□ -1.88
LDB2O43679 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB2O43679 MTND1P18-201ENST00000448191 573 ntBASIC3.33□□□□□ -1.88
LDB2O43679 AL136097.1-201ENST00000456945 913 ntBASIC3.33□□□□□ -1.88
LDB2O43679 snoU13.24-201ENST00000458998 104 ntBASIC3.33□□□□□ -1.88
LDB2O43679 RPS20P20-201ENST00000460498 340 ntBASIC3.33□□□□□ -1.88
LDB2O43679 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB2O43679 AC008549.1-201ENST00000512900 643 ntBASIC3.33□□□□□ -1.88
LDB2O43679 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms