Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SMAD6O43541 RNA5SP197-201ENST00000363357 119 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 RNA5SP72-201ENST00000364442 117 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 Y_RNA.255-201ENST00000364581 97 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SMAD6O43541 Y_RNA.474-201ENST00000384341 102 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 RNU6-1207P-201ENST00000384343 107 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 RNU6-510P-201ENST00000391239 108 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 TXNP7-201ENST00000406296 293 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 MTND3P8-201ENST00000412909 339 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.48□□□□□ -1.85
SMAD6O43541 NDUFB4P5-201ENST00000415445 361 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 AC012065.2-201ENST00000421295 375 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 IFNA20P-201ENST00000436840 528 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.48□□□□□ -1.85
SMAD6O43541 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.48□□□□□ -1.85
SMAD6O43541 HMGB3P8-201ENST00000449709 577 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 AC104073.1-201ENST00000451988 151 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 RPS24P6-201ENST00000452670 400 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 HMGB1P15-201ENST00000453854 435 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 AC055855.1-201ENST00000489563 579 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.48□□□□□ -1.85
SMAD6O43541 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.48□□□□□ -1.85
SMAD6O43541 RNU1-61P-201ENST00000516107 151 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 RNU6-1045P-201ENST00000516321 107 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 RNA5SP468-201ENST00000516782 93 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 RNU6-410P-201ENST00000517006 107 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 RNU6-1314P-201ENST00000517139 104 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 AP003497.1-201ENST00000528472 562 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.48□□□□□ -1.85
SMAD6O43541 AC005668.1-201ENST00000571142 476 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 MIR4742-201ENST00000581069 85 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.48□□□□□ -1.85
SMAD6O43541 AP000942.4-201ENST00000604811 241 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 AC021646.1-201ENST00000605469 484 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 AC093913.1-201ENST00000614178 329 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.48□□□□□ -1.85
SMAD6O43541 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SMAD6O43541 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SMAD6O43541 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SMAD6O43541 AC097714.1-201ENST00000511272 1647 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.48□□□□□ -1.85
SMAD6O43541 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.48□□□□□ -1.85
SMAD6O43541 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SMAD6O43541 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SMAD6O43541 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SMAD6O43541 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SMAD6O43541 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.47□□□□□ -1.85
SMAD6O43541 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SMAD6O43541 MFSD8-233ENST00000641482 4860 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 Y_RNA.234-201ENST00000364409 97 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 RNA5SP267-201ENST00000364893 126 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 RNU6-996P-201ENST00000365438 107 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.47□□□□□ -1.85
SMAD6O43541 AC009161.1-201ENST00000417306 376 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.47□□□□□ -1.85
SMAD6O43541 AC005300.1-201ENST00000428401 373 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.47□□□□□ -1.85
SMAD6O43541 AC079781.2-201ENST00000446424 169 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 AL356010.1-201ENST00000456364 102 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 Y_RNA.632-201ENST00000459189 102 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 HMGN2P26-201ENST00000463169 339 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 MRPS17P3-201ENST00000465453 385 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 AC006512.1-201ENST00000468816 291 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 AL163973.1-201ENST00000484753 577 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 RPL23AP41-201ENST00000484754 458 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 MTND4LP22-201ENST00000508209 276 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.47□□□□□ -1.85
SMAD6O43541 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.47□□□□□ -1.85
SMAD6O43541 RNU4-49P-201ENST00000516080 140 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SMAD6O43541 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.47□□□□□ -1.85
SMAD6O43541 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.47□□□□□ -1.85
SMAD6O43541 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.47□□□□□ -1.85
SMAD6O43541 PSMA3P-201ENST00000555485 635 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.47□□□□□ -1.85
SMAD6O43541 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.47□□□□□ -1.85
SMAD6O43541 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SMAD6O43541 MIR4738-201ENST00000579134 87 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.47□□□□□ -1.85
SMAD6O43541 RPL23AP92-201ENST00000603609 255 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 AC113139.1-201ENST00000605049 239 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 RNVU1-4-201ENST00000612985 164 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.47□□□□□ -1.85
SMAD6O43541 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.47□□□□□ -1.85
SMAD6O43541 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
SMAD6O43541 AC032011.1-201ENST00000611703 1549 ntBASIC3.47□□□□□ -1.85
SMAD6O43541 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SMAD6O43541 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.47□□□□□ -1.85
SMAD6O43541 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SMAD6O43541 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SMAD6O43541 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SMAD6O43541 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.46□□□□□ -1.86
SMAD6O43541 AL356274.2-201ENST00000624379 3752 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMAD6O43541 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SMAD6O43541 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMAD6O43541 Y_RNA.333-201ENST00000365274 102 ntBASIC3.46□□□□□ -1.86
SMAD6O43541 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms