Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SCARNA18-201ENST00000459004 134 ntBASIC3.79□□□□□ -1.8
PROM1O43490 RNU7-66P-201ENST00000459469 62 ntBASIC3.79□□□□□ -1.8
PROM1O43490 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.79□□□□□ -1.8
PROM1O43490 AC010285.1-201ENST00000470580 392 ntBASIC3.79□□□□□ -1.8
PROM1O43490 RPL31P61-201ENST00000496160 376 ntBASIC3.79□□□□□ -1.8
PROM1O43490 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.79□□□□□ -1.8
PROM1O43490 RNU6-1170P-201ENST00000515974 106 ntBASIC3.79□□□□□ -1.8
PROM1O43490 RNU6-123P-201ENST00000516163 102 ntBASIC3.79□□□□□ -1.8
PROM1O43490 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.79□□□□□ -1.8
PROM1O43490 AC091516.1-201ENST00000549191 703 ntBASIC3.79□□□□□ -1.8
PROM1O43490 AL121603.1-201ENST00000553815 142 ntBASIC3.79□□□□□ -1.8
PROM1O43490 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.79□□□□□ -1.8
PROM1O43490 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.79□□□□□ -1.8
PROM1O43490 RPL23AP84-201ENST00000571193 464 ntBASIC3.79□□□□□ -1.8
PROM1O43490 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.79□□□□□ -1.8
PROM1O43490 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.79□□□□□ -1.8
PROM1O43490 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.79□□□□□ -1.8
PROM1O43490 APOOP1-201ENST00000604695 592 ntBASIC3.79□□□□□ -1.8
PROM1O43490 Z82243.1-201ENST00000609432 473 ntBASIC3.79□□□□□ -1.8
PROM1O43490 DUSP12P1-201ENST00000612874 516 ntBASIC3.79□□□□□ -1.8
PROM1O43490 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.79□□□□□ -1.8
PROM1O43490 AC084781.2-201ENST00000615568 161 ntBASIC3.79□□□□□ -1.8
PROM1O43490 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PROM1O43490 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PROM1O43490 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PROM1O43490 AL672296.1-201ENST00000427780 2158 ntBASIC3.79□□□□□ -1.8
PROM1O43490 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PROM1O43490 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PROM1O43490 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PROM1O43490 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PROM1O43490 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PROM1O43490 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PROM1O43490 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PROM1O43490 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PROM1O43490 MIR208A-201ENST00000362287 71 ntBASIC3.78□□□□□ -1.8
PROM1O43490 Y_RNA.132-201ENST00000363421 102 ntBASIC3.78□□□□□ -1.8
PROM1O43490 SNORD113-7-201ENST00000363762 77 ntBASIC3.78□□□□□ -1.8
PROM1O43490 RNA5SP387-201ENST00000364226 106 ntBASIC3.78□□□□□ -1.8
PROM1O43490 U3.12-201ENST00000364498 214 ntBASIC3.78□□□□□ -1.8
PROM1O43490 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PROM1O43490 AP000567.1-201ENST00000406413 156 ntBASIC3.78□□□□□ -1.8
PROM1O43490 RNU2-43P-201ENST00000410306 190 ntBASIC3.78□□□□□ -1.8
PROM1O43490 RNU6-1304P-201ENST00000411374 106 ntBASIC3.78□□□□□ -1.8
PROM1O43490 POLHP1-201ENST00000411806 470 ntBASIC3.78□□□□□ -1.8
PROM1O43490 AC017083.1-201ENST00000428093 483 ntBASIC3.78□□□□□ -1.8
PROM1O43490 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.78□□□□□ -1.8
PROM1O43490 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.78□□□□□ -1.8
PROM1O43490 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.78□□□□□ -1.8
PROM1O43490 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.78□□□□□ -1.8
PROM1O43490 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.78□□□□□ -1.8
PROM1O43490 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.78□□□□□ -1.8
PROM1O43490 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.78□□□□□ -1.8
PROM1O43490 RPL23AP62-201ENST00000463396 453 ntBASIC3.78□□□□□ -1.8
PROM1O43490 RPL39P5-202ENST00000512505 151 ntBASIC3.78□□□□□ -1.8
PROM1O43490 SNORA25.17-201ENST00000517184 124 ntBASIC3.78□□□□□ -1.8
PROM1O43490 RNU6-840P-201ENST00000517275 65 ntBASIC3.78□□□□□ -1.8
PROM1O43490 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.78□□□□□ -1.8
PROM1O43490 AP000889.2-201ENST00000532684 490 ntBASIC3.78□□□□□ -1.8
PROM1O43490 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PROM1O43490 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.78□□□□□ -1.8
PROM1O43490 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.78□□□□□ -1.8
PROM1O43490 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.78□□□□□ -1.8
PROM1O43490 GNRHR2P1-201ENST00000555315 631 ntBASIC3.78□□□□□ -1.8
PROM1O43490 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
PROM1O43490 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.78□□□□□ -1.8
PROM1O43490 AC008521.1-201ENST00000587471 187 ntBASIC3.78□□□□□ -1.8
PROM1O43490 POLR3GP2-201ENST00000588366 668 ntBASIC3.78□□□□□ -1.8
PROM1O43490 AC012409.4-201ENST00000612923 249 ntBASIC3.78□□□□□ -1.8
PROM1O43490 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PROM1O43490 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.78□□□□□ -1.8
PROM1O43490 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PROM1O43490 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PROM1O43490 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PROM1O43490 RLIMP1-201ENST00000339626 1680 ntBASIC3.78□□□□□ -1.81
PROM1O43490 AC093908.1-201ENST00000623125 8092 ntBASIC3.77□□□□□ -1.81
PROM1O43490 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PROM1O43490 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PROM1O43490 RNA5SP219-201ENST00000390940 113 ntBASIC3.77□□□□□ -1.81
PROM1O43490 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.77□□□□□ -1.81
PROM1O43490 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PROM1O43490 NIPA2P5-201ENST00000452282 464 ntBASIC3.77□□□□□ -1.81
PROM1O43490 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.77□□□□□ -1.81
PROM1O43490 TRBV1-201ENST00000476502 284 ntBASIC3.77□□□□□ -1.81
PROM1O43490 TRBVA-201ENST00000498804 316 ntBASIC3.77□□□□□ -1.81
PROM1O43490 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.77□□□□□ -1.81
PROM1O43490 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PROM1O43490 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PROM1O43490 AC098591.2-201ENST00000510152 315 ntBASIC3.77□□□□□ -1.81
PROM1O43490 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.77□□□□□ -1.81
PROM1O43490 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.77□□□□□ -1.81
PROM1O43490 RNU6-1088P-201ENST00000516850 104 ntBASIC3.77□□□□□ -1.81
PROM1O43490 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.77□□□□□ -1.81
PROM1O43490 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.77□□□□□ -1.81
PROM1O43490 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.77□□□□□ -1.81
PROM1O43490 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.77□□□□□ -1.81
PROM1O43490 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.77□□□□□ -1.81
PROM1O43490 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.77□□□□□ -1.81
PROM1O43490 MIR4790-201ENST00000577799 79 ntBASIC3.77□□□□□ -1.81
PROM1O43490 AL138889.2-201ENST00000603883 242 ntBASIC3.77□□□□□ -1.81
PROM1O43490 AL360085.1-201ENST00000604713 532 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms