Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF3O43395 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPF3O43395 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF3O43395 HIGD1AP1-201ENST00000550979 275 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 AMZ2P1-203ENST00000565833 850 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
PRPF3O43395 MIR3944-201ENST00000581277 108 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPF3O43395 AC103710.3-201ENST00000608157 948 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 AC068831.7-201ENST00000616954 363 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF3O43395 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF3O43395 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PRPF3O43395 TNPO1P3-201ENST00000436471 2662 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF3O43395 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF3O43395 CKAP2P1-201ENST00000555477 2049 ntBASIC4□□□□□ -1.77
PRPF3O43395 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PRPF3O43395 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4□□□□□ -1.77
PRPF3O43395 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF3O43395 AL049781.1-201ENST00000623195 3585 ntBASIC4□□□□□ -1.77
PRPF3O43395 Y_RNA.255-201ENST00000364581 97 ntBASIC4□□□□□ -1.77
PRPF3O43395 RNU6-217P-201ENST00000384164 104 ntBASIC4□□□□□ -1.77
PRPF3O43395 Y_RNA.450-201ENST00000384198 113 ntBASIC4□□□□□ -1.77
PRPF3O43395 RNU6-1035P-201ENST00000384477 107 ntBASIC4□□□□□ -1.77
PRPF3O43395 MIR218-2-201ENST00000385006 110 ntBASIC4□□□□□ -1.77
PRPF3O43395 AC068050.1-201ENST00000394891 380 ntBASIC4□□□□□ -1.77
PRPF3O43395 BTF3L4P3-201ENST00000418879 476 ntBASIC4□□□□□ -1.77
PRPF3O43395 AC093106.2-201ENST00000428212 385 ntBASIC4□□□□□ -1.77
PRPF3O43395 AP000907.1-201ENST00000428428 510 ntBASIC4□□□□□ -1.77
PRPF3O43395 AC000111.3-201ENST00000433478 193 ntBASIC4□□□□□ -1.77
PRPF3O43395 AC092573.2-201ENST00000434546 243 ntBASIC4□□□□□ -1.77
PRPF3O43395 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4□□□□□ -1.77
PRPF3O43395 AC016691.1-201ENST00000441321 413 ntBASIC4□□□□□ -1.77
PRPF3O43395 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4□□□□□ -1.77
PRPF3O43395 FGF7P6-202ENST00000451282 293 ntBASIC4□□□□□ -1.77
PRPF3O43395 FABP5P15-201ENST00000453566 214 ntBASIC4□□□□□ -1.77
PRPF3O43395 AC025518.1-201ENST00000479856 347 ntBASIC4□□□□□ -1.77
PRPF3O43395 AC104806.1-201ENST00000508720 308 ntBASIC4□□□□□ -1.77
PRPF3O43395 AC110768.1-201ENST00000509222 400 ntBASIC4□□□□□ -1.77
PRPF3O43395 PCBP2P3-201ENST00000509726 843 ntBASIC4□□□□□ -1.77
PRPF3O43395 SNORA70.19-201ENST00000516717 90 ntBASIC4□□□□□ -1.77
PRPF3O43395 AK6P1-201ENST00000540219 478 ntBASIC4□□□□□ -1.77
PRPF3O43395 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4□□□□□ -1.77
PRPF3O43395 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4□□□□□ -1.77
PRPF3O43395 MIR4703-201ENST00000577728 79 ntBASIC4□□□□□ -1.77
PRPF3O43395 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4□□□□□ -1.77
PRPF3O43395 MIR3941-201ENST00000582572 103 ntBASIC4□□□□□ -1.77
PRPF3O43395 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4□□□□□ -1.77
PRPF3O43395 AC008962.1-201ENST00000605729 304 ntBASIC4□□□□□ -1.77
PRPF3O43395 AC093788.1-201ENST00000609356 927 ntBASIC4□□□□□ -1.77
PRPF3O43395 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4□□□□□ -1.77
PRPF3O43395 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PRPF3O43395 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRPF3O43395 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
PRPF3O43395 AC032011.1-201ENST00000611703 1549 ntBASIC4□□□□□ -1.77
PRPF3O43395 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
PRPF3O43395 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRPF3O43395 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
PRPF3O43395 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PRPF3O43395 Y_RNA.576-201ENST00000384781 102 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PRPF3O43395 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PRPF3O43395 RNU6-1158P-201ENST00000391167 107 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 RPS29P4-201ENST00000414733 161 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 OR6C66P-201ENST00000414917 930 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 USP9YP27-201ENST00000418455 438 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 HMGN2P31-201ENST00000432430 273 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF3O43395 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF3O43395 AL358232.1-201ENST00000448030 501 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 HMGB3P8-201ENST00000449709 577 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 AL136097.1-201ENST00000456945 913 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 RPL21P8-201ENST00000465083 535 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 AC006512.1-201ENST00000468816 291 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 RPL23AP11-201ENST00000475260 469 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF3O43395 RNU6-1281P-201ENST00000516223 105 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 Y_RNA.704-201ENST00000516851 102 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 IGKV2-23-201ENST00000518729 323 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.99□□□□□ -1.77
PRPF3O43395 SNORA59B-202ENST00000578183 701 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 AC006504.3-201ENST00000586818 523 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 AC008521.1-201ENST00000587471 187 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 AL355598.1-201ENST00000604169 202 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 AC136601.2-201ENST00000604356 474 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 RBM11P1-201ENST00000604951 799 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 AC011155.2-201ENST00000623202 216 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF3O43395 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PRPF3O43395 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PRPF3O43395 AC058791.1-201ENST00000608412 3198 ntBASIC3.99□□□□□ -1.77
PRPF3O43395 AC006020.1-201ENST00000420179 1854 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 RNU4-35P-201ENST00000362588 141 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 RNU6-1029P-201ENST00000384109 107 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 Y_RNA.534-201ENST00000384599 112 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 SNORA11.1-201ENST00000408133 129 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF3O43395 SNRPEP10-201ENST00000420249 274 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms