Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGB3O15347 AC104763.2-201ENST00000604179 382 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 MIR5739-201ENST00000619803 80 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.37□□□□□ -2.19
HMGB3O15347 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMGB3O15347 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGB3O15347 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
HMGB3O15347 RNA5SP387-201ENST00000364226 106 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 RNA5SP240-201ENST00000365355 128 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 SNORA70.4-201ENST00000365509 134 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 AC083799.1-201ENST00000366451 910 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 MIR95-201ENST00000385072 81 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 SNORA40.19-201ENST00000390846 128 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 RNA5SP212-201ENST00000391223 107 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMGB3O15347 MIR934-201ENST00000401241 83 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 RNU6-1140P-201ENST00000410517 106 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.36□□□□□ -2.19
HMGB3O15347 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGB3O15347 CR848007.2-201ENST00000424918 787 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 MTND4LP7-201ENST00000431728 294 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 AL645568.3-201ENST00000433683 316 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGB3O15347 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGB3O15347 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGB3O15347 HMGN2P10-201ENST00000448085 265 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 AL096803.2-201ENST00000450032 677 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 SNORD121B-201ENST00000458838 81 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 AC117503.1-201ENST00000472241 394 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 AC106872.3-201ENST00000495104 446 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 RPS29P11-201ENST00000496507 171 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMGB3O15347 AC067805.1-201ENST00000559344 470 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMGB3O15347 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGB3O15347 AL357094.1-201ENST00000603845 844 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGB3O15347 AC103810.8-201ENST00000607347 118 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGB3O15347 AC107075.1-201ENST00000613695 314 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGB3O15347 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.36□□□□□ -2.19
HMGB3O15347 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HMGB3O15347 U8.3-201ENST00000363321 132 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.35□□□□□ -2.19
HMGB3O15347 RNU6-549P-201ENST00000384433 107 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 PTGES3P2-201ENST00000407942 482 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 TPMTP3-201ENST00000411928 735 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 RPL26P27-201ENST00000414397 437 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 BTF3P8-201ENST00000414577 526 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 LUZP4P1-201ENST00000415420 344 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 RPL23AP39-201ENST00000415533 405 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 AC007435.1-201ENST00000421086 415 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 AL121882.1-201ENST00000422893 417 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGB3O15347 COX6CP18-201ENST00000448769 222 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 OFD1P3Y-201ENST00000453312 783 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGB3O15347 RPS15AP17-201ENST00000470598 390 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
HMGB3O15347 AP004607.1-201ENST00000524456 203 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGB3O15347 MTCYBP23-201ENST00000558717 1102 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 AC104581.2-201ENST00000572227 430 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 AC002545.1-201ENST00000592511 181 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 BNIP3P25-201ENST00000596023 559 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 AC004805.2-201ENST00000605382 482 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGB3O15347 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 AC003001.2-201ENST00000616294 831 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 AC005539.1-201ENST00000443768 1479 ntBASIC1.35□□□□□ -2.19
HMGB3O15347 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGB3O15347 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HMGB3O15347 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HMGB3O15347 MIR126-201ENST00000362291 85 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 Y_RNA.333-201ENST00000365274 102 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 RNU1-39P-201ENST00000383897 165 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 RNU6-932P-201ENST00000391108 106 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.34□□□□□ -2.19
HMGB3O15347 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HMGB3O15347 AC002381.1-201ENST00000447049 280 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 MTCYBP11-201ENST00000447254 1109 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 RPL39P6-201ENST00000448289 150 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 AC092902.1-201ENST00000486999 259 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.34□□□□□ -2.19
HMGB3O15347 RPL38P4-201ENST00000502376 214 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 AC093677.1-201ENST00000514414 678 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 SNORA4.4-201ENST00000515921 135 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 RNU6-840P-201ENST00000517275 65 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGB3O15347 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGB3O15347 AC006199.1-201ENST00000548728 219 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 AC125611.1-201ENST00000549563 229 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
HMGB3O15347 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGB3O15347 MIR4713-201ENST00000582691 75 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms