Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SCARNA15.3-201ENST00000626315 122 ntBASIC4.83□□□□□ -1.64
SOX1O00570 SCARNA4.1-201ENST00000628597 123 ntBASIC4.83□□□□□ -1.64
SOX1O00570 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX1O00570 AC107027.3-201ENST00000565095 3473 ntBASIC4.83□□□□□ -1.64
SOX1O00570 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SOX1O00570 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX1O00570 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SOX1O00570 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX1O00570 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SOX1O00570 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX1O00570 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.82□□□□□ -1.64
SOX1O00570 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX1O00570 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX1O00570 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX1O00570 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SOX1O00570 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX1O00570 MAPK10-328ENST00000641553 4009 ntBASIC4.82□□□□□ -1.64
SOX1O00570 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
SOX1O00570 SNORA70E-201ENST00000384492 135 ntBASIC4.82□□□□□ -1.64
SOX1O00570 Y_RNA.533-201ENST00000384596 114 ntBASIC4.82□□□□□ -1.64
SOX1O00570 RNU6-1179P-201ENST00000384667 107 ntBASIC4.82□□□□□ -1.64
SOX1O00570 MIR628-201ENST00000385229 95 ntBASIC4.82□□□□□ -1.64
SOX1O00570 SNORA69.1-201ENST00000390904 137 ntBASIC4.82□□□□□ -1.64
SOX1O00570 U3.42-201ENST00000408746 214 ntBASIC4.82□□□□□ -1.64
SOX1O00570 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.82□□□□□ -1.64
SOX1O00570 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX1O00570 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX1O00570 RPL7AP49-201ENST00000429522 581 ntBASIC4.82□□□□□ -1.64
SOX1O00570 AL591438.1-201ENST00000433508 581 ntBASIC4.82□□□□□ -1.64
SOX1O00570 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX1O00570 RPL19P16-201ENST00000433839 588 ntBASIC4.82□□□□□ -1.64
SOX1O00570 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX1O00570 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX1O00570 AL590399.6-201ENST00000446396 307 ntBASIC4.82□□□□□ -1.64
SOX1O00570 AC110792.1-201ENST00000491826 472 ntBASIC4.82□□□□□ -1.64
SOX1O00570 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX1O00570 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX1O00570 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX1O00570 uc_338.13-201ENST00000618243 179 ntBASIC4.82□□□□□ -1.64
SOX1O00570 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SOX1O00570 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX1O00570 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX1O00570 AL161912.2-201ENST00000565707 3007 ntBASIC4.82□□□□□ -1.64
SOX1O00570 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SOX1O00570 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.82□□□□□ -1.64
SOX1O00570 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
SOX1O00570 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SOX1O00570 ZNF299P-201ENST00000406845 1804 ntBASIC4.81□□□□□ -1.64
SOX1O00570 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
SOX1O00570 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
SOX1O00570 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX1O00570 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX1O00570 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX1O00570 RNA5SP52-201ENST00000362448 134 ntBASIC4.81□□□□□ -1.64
SOX1O00570 RNU6-882P-201ENST00000391025 103 ntBASIC4.81□□□□□ -1.64
SOX1O00570 RNU6-700P-201ENST00000391043 107 ntBASIC4.81□□□□□ -1.64
SOX1O00570 RNA5SP241-201ENST00000391326 114 ntBASIC4.81□□□□□ -1.64
SOX1O00570 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.81□□□□□ -1.64
SOX1O00570 AC092423.1-201ENST00000430165 186 ntBASIC4.81□□□□□ -1.64
SOX1O00570 RANP8-201ENST00000444720 713 ntBASIC4.81□□□□□ -1.64
SOX1O00570 AL392103.1-201ENST00000447000 198 ntBASIC4.81□□□□□ -1.64
SOX1O00570 ABCF2P2-201ENST00000450549 296 ntBASIC4.81□□□□□ -1.64
SOX1O00570 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.81□□□□□ -1.64
SOX1O00570 HMGN2P13-201ENST00000476476 274 ntBASIC4.81□□□□□ -1.64
SOX1O00570 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX1O00570 SNORA81.3-201ENST00000517283 198 ntBASIC4.81□□□□□ -1.64
SOX1O00570 AC022080.3-201ENST00000544433 482 ntBASIC4.81□□□□□ -1.64
SOX1O00570 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.81□□□□□ -1.64
SOX1O00570 RN7SL290P-201ENST00000578661 300 ntBASIC4.81□□□□□ -1.64
SOX1O00570 MIR5701-3-201ENST00000578890 82 ntBASIC4.81□□□□□ -1.64
SOX1O00570 MIR5195-201ENST00000583555 115 ntBASIC4.81□□□□□ -1.64
SOX1O00570 MIR5701-1-201ENST00000585138 82 ntBASIC4.81□□□□□ -1.64
SOX1O00570 AL158827.2-201ENST00000602494 330 ntBASIC4.81□□□□□ -1.64
SOX1O00570 AC009779.6-201ENST00000603972 165 ntBASIC4.81□□□□□ -1.64
SOX1O00570 MIR5701-2-201ENST00000615634 82 ntBASIC4.81□□□□□ -1.64
SOX1O00570 AL691447.3-201ENST00000635020 330 ntBASIC4.81□□□□□ -1.64
SOX1O00570 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX1O00570 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SOX1O00570 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.81□□□□□ -1.64
SOX1O00570 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SOX1O00570 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX1O00570 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX1O00570 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX1O00570 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX1O00570 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX1O00570 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX1O00570 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX1O00570 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
SOX1O00570 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
SOX1O00570 AC010300.1-201ENST00000600671 5134 ntBASIC4.8□□□□□ -1.64
SOX1O00570 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX1O00570 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SOX1O00570 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX1O00570 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX1O00570 RPL9P7-201ENST00000330965 580 ntBASIC4.8□□□□□ -1.64
SOX1O00570 MIR133A2-201ENST00000347538 102 ntBASIC4.8□□□□□ -1.64
SOX1O00570 SNORA5.1-201ENST00000384275 131 ntBASIC4.8□□□□□ -1.64
SOX1O00570 RNU6-837P-201ENST00000391056 108 ntBASIC4.8□□□□□ -1.64
SOX1O00570 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX1O00570 RNU2-71P-201ENST00000411395 189 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms