Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC188H7C350 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC188H7C350 AC137800.2-201ENST00000574375 120 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 AC009977.1-201ENST00000586015 570 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 Z99497.2-201ENST00000603634 310 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 AC005046.1-201ENST00000608515 625 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC188H7C350 AC011939.3-201ENST00000613686 466 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 AC002064.3-201ENST00000623448 346 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 CR381653.2-201ENST00000624041 768 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 AC110994.2-201ENST00000635481 492 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 AP003399.1-201ENST00000637534 361 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 AC092435.3-201ENST00000565538 3654 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC188H7C350 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CCDC188H7C350 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC188H7C350 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 SNORD56.2-201ENST00000363242 71 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 RNU6-511P-201ENST00000363496 107 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 U8.9-201ENST00000365667 134 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 RNU6-851P-201ENST00000384565 107 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 SNORA40.3-201ENST00000390964 122 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AC127391.1-201ENST00000411737 98 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC188H7C350 AC005326.1-201ENST00000429197 123 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AL592045.1-201ENST00000429867 352 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 RPS15AP5-201ENST00000436276 388 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC188H7C350 CYCSP32-201ENST00000440548 321 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 RPS15AP27-201ENST00000449183 343 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC188H7C350 snoU109.1-201ENST00000459339 135 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 MRPS17P3-201ENST00000465453 385 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AC128713.1-201ENST00000471495 306 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 NDUFB4P2-201ENST00000509515 391 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC188H7C350 RN7SKP282-201ENST00000516824 299 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 HMGB1P41-201ENST00000520234 440 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AC022634.1-201ENST00000520765 532 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AC060788.1-201ENST00000521318 469 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AC087373.1-201ENST00000524920 491 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC188H7C350 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC188H7C350 RPS3AP4-201ENST00000555161 764 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC188H7C350 AC010653.1-201ENST00000571108 881 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 BNIP3P9-201ENST00000603714 553 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AC104763.2-201ENST00000604179 382 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AC007363.1-201ENST00000604736 620 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC188H7C350 AC073114.1-201ENST00000612027 490 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AL442067.2-201ENST00000614033 363 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AL133173.2-201ENST00000614270 90 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AL512643.1-201ENST00000635735 524 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC188H7C350 AC008669.1-201ENST00000565823 2178 ntBASIC2.94□□□□□ -1.94
CCDC188H7C350 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CCDC188H7C350 HSPE1P11-201ENST00000339579 310 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 RNU5E-1-201ENST00000362477 120 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 RNU6-188P-201ENST00000364207 107 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 RNU5E-6P-201ENST00000365574 115 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 RNU2-49P-201ENST00000410666 184 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 HMGN1P14-201ENST00000412459 517 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC188H7C350 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC188H7C350 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC188H7C350 AL591212.2-201ENST00000433923 257 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 MRPL50P4-201ENST00000446432 475 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC188H7C350 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC188H7C350 MTCO2P29-201ENST00000465212 189 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 AC008571.1-201ENST00000467232 300 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 AC008885.1-201ENST00000514930 301 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC188H7C350 SUB1P1-201ENST00000524415 382 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC188H7C350 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC188H7C350 AC025281.1-201ENST00000567026 265 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 MIR3682-201ENST00000581338 84 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC188H7C350 CLIC4P2-201ENST00000601934 717 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 DUXAP4-201ENST00000603046 613 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 AL355598.1-201ENST00000604169 202 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 AL627309.6-201ENST00000606857 840 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 AC103710.2-201ENST00000609912 942 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 AC007998.5-201ENST00000622938 237 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 AC005858.4-201ENST00000623191 700 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC188H7C350 MIR3651-201ENST00000630427 90 ntBASIC2.93□□□□□ -1.94
CCDC188H7C350 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC188H7C350 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC188H7C350 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC188H7C350 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC188H7C350 AC073343.1-201ENST00000328239 651 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC188H7C350 SMIM11P1-201ENST00000369586 178 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC188H7C350 RNU6-641P-201ENST00000384006 107 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms