Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 snoU13.4-201ENST00000458916 104 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC072039.1-201ENST00000477611 581 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC109486.1-201ENST00000486833 374 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC004062.1-201ENST00000509926 645 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC109464.2-201ENST00000510242 943 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNU1-104P-201ENST00000517280 175 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC013828.2-201ENST00000532487 235 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 OR5BN1P-201ENST00000532955 829 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 SNRPGP16-201ENST00000533275 226 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 SNRPGP18-201ENST00000553000 214 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 MED28P6-201ENST00000558776 231 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC091489.2-201ENST00000566263 604 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC025281.1-201ENST00000567026 265 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 ROCK1P1-201ENST00000573767 549 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 FAM60BP-201ENST00000578364 658 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 MTCYBP22-201ENST00000603788 447 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL031176.1-201ENST00000604554 466 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC103810.6-201ENST00000606708 136 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC122133.1-201ENST00000613964 233 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL450472.3-201ENST00000615578 367 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 MIR7844-201ENST00000616161 122 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 SNHG22-203ENST00000617833 660 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC079597.1-201ENST00000624306 508 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNU5E-8P-201ENST00000363502 116 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNU6-114P-201ENST00000384704 105 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNU6-253P-201ENST00000384730 105 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNU6-920P-201ENST00000410926 92 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC078974.1-201ENST00000411597 223 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 TPMTP3-201ENST00000411928 735 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL513477.1-202ENST00000417061 214 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 MTND2P18-201ENST00000419962 1030 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC234781.2-201ENST00000426370 994 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 OR4K11P-201ENST00000431829 904 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 RAC1P7-201ENST00000445367 377 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 RPS27AP8-201ENST00000452665 445 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 snoU13.8-201ENST00000458890 104 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNA5SP281-201ENST00000516504 135 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 RN7SKP40-201ENST00000517211 242 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 ERHP1-201ENST00000523006 310 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC026464.5-201ENST00000562497 722 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC009163.5-201ENST00000575421 637 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC010620.2-201ENST00000600135 313 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL391813.2-201ENST00000609113 322 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC009159.1-201ENST00000618386 642 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 MIR6873-201ENST00000622788 63 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL356266.1-201ENST00000623311 483 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC091965.5-201ENST00000624785 342 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC006927.3-201ENST00000638789 384 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC009902.3-201ENST00000606235 2172 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC090740.1-201ENST00000623193 2262 ntBASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TMX2-CTNND1H3BSU7 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 MIR21-201ENST00000362134 72 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNU4-21P-201ENST00000362802 126 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNU6-97P-201ENST00000363387 104 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNU6-853P-201ENST00000364306 107 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 MIR627-201ENST00000384979 97 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 RPS3AP24-201ENST00000407896 734 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 HMGB1P11-201ENST00000413899 637 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL137014.1-201ENST00000420490 1226 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 Z99497.1-201ENST00000421282 135 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 PPP1R11P2-201ENST00000423543 382 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL365184.2-201ENST00000431139 435 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 ZNF114P1-201ENST00000453500 292 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AP000852.1-201ENST00000472460 573 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 MTND3P7-201ENST00000474435 343 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 RPL36AP51-201ENST00000487216 318 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms