Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RCCD1A6NED2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RCCD1A6NED2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RCCD1A6NED2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RCCD1A6NED2 RNU5B-2P-201ENST00000363036 113 ntBASIC5.59□□□□□ -1.51
RCCD1A6NED2 RNU4-80P-201ENST00000363200 141 ntBASIC5.59□□□□□ -1.51
RCCD1A6NED2 RNU6-818P-201ENST00000364837 108 ntBASIC5.59□□□□□ -1.51
RCCD1A6NED2 RNU4-17P-201ENST00000365598 141 ntBASIC5.59□□□□□ -1.51
RCCD1A6NED2 U3.37-201ENST00000408528 213 ntBASIC5.59□□□□□ -1.51
RCCD1A6NED2 BMS1P17-202ENST00000416720 316 ntBASIC5.59□□□□□ -1.51
RCCD1A6NED2 AL445665.1-202ENST00000452436 324 ntBASIC5.59□□□□□ -1.51
RCCD1A6NED2 AL137159.1-201ENST00000452808 512 ntBASIC5.59□□□□□ -1.51
RCCD1A6NED2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.59□□□□□ -1.51
RCCD1A6NED2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.59□□□□□ -1.51
RCCD1A6NED2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.59□□□□□ -1.51
RCCD1A6NED2 RN7SL708P-201ENST00000580952 299 ntBASIC5.59□□□□□ -1.51
RCCD1A6NED2 AC000068.2-201ENST00000608816 460 ntBASIC5.59□□□□□ -1.51
RCCD1A6NED2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.59□□□□□ -1.51
RCCD1A6NED2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RCCD1A6NED2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RCCD1A6NED2 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RCCD1A6NED2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RCCD1A6NED2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
RCCD1A6NED2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
RCCD1A6NED2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RCCD1A6NED2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.58□□□□□ -1.52
RCCD1A6NED2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RCCD1A6NED2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RCCD1A6NED2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RCCD1A6NED2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RCCD1A6NED2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RCCD1A6NED2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RCCD1A6NED2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RCCD1A6NED2 RNU6-1325P-201ENST00000364905 105 ntBASIC5.58□□□□□ -1.52
RCCD1A6NED2 SNORA72.2-201ENST00000365028 127 ntBASIC5.58□□□□□ -1.52
RCCD1A6NED2 RNA5SP284-201ENST00000384547 118 ntBASIC5.58□□□□□ -1.52
RCCD1A6NED2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RCCD1A6NED2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.58□□□□□ -1.52
RCCD1A6NED2 AC243964.1-201ENST00000441814 261 ntBASIC5.58□□□□□ -1.52
RCCD1A6NED2 AL589765.3-201ENST00000446084 462 ntBASIC5.58□□□□□ -1.52
RCCD1A6NED2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.58□□□□□ -1.52
RCCD1A6NED2 AL132838.2-201ENST00000492041 314 ntBASIC5.58□□□□□ -1.52
RCCD1A6NED2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.58□□□□□ -1.52
RCCD1A6NED2 AC006349.1-201ENST00000555526 235 ntBASIC5.58□□□□□ -1.52
RCCD1A6NED2 AC233702.2-202ENST00000562547 291 ntBASIC5.58□□□□□ -1.52
RCCD1A6NED2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.58□□□□□ -1.52
RCCD1A6NED2 AC126915.2-201ENST00000610957 190 ntBASIC5.58□□□□□ -1.52
RCCD1A6NED2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.58□□□□□ -1.52
RCCD1A6NED2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.58□□□□□ -1.52
RCCD1A6NED2 U6.99-201ENST00000637524 83 ntBASIC5.58□□□□□ -1.52
RCCD1A6NED2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RCCD1A6NED2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RCCD1A6NED2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.58□□□□□ -1.52
RCCD1A6NED2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RCCD1A6NED2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RCCD1A6NED2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RCCD1A6NED2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RCCD1A6NED2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.57□□□□□ -1.52
RCCD1A6NED2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RCCD1A6NED2 RNA5SP234-201ENST00000363916 119 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RCCD1A6NED2 SNORD116-14-201ENST00000383894 92 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 SNORD116-17-201ENST00000383929 92 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 SNORD116-15-201ENST00000384445 92 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 SNORD116-20-201ENST00000384529 92 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 SNORD116-19-201ENST00000384729 92 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RCCD1A6NED2 MIR1290-201ENST00000408735 78 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 RNA5SP31-201ENST00000411144 127 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.57□□□□□ -1.52
RCCD1A6NED2 MTND6P12-201ENST00000428247 522 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 Z82210.1-201ENST00000440037 231 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 RN7SL591P-201ENST00000496150 292 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 AC091874.1-201ENST00000511402 339 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 SNORD46.2-201ENST00000516021 102 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.57□□□□□ -1.52
RCCD1A6NED2 AP004607.1-201ENST00000524456 203 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.57□□□□□ -1.52
RCCD1A6NED2 AL356157.2-201ENST00000605122 111 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 AL008718.3-201ENST00000610217 321 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RCCD1A6NED2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.57□□□□□ -1.52
RCCD1A6NED2 BX005214.3-202ENST00000619809 325 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 AC048347.1-201ENST00000624621 427 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RCCD1A6NED2 AC063976.2-201ENST00000425667 3556 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 AC104623.2-202ENST00000623477 4002 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.57□□□□□ -1.52
RCCD1A6NED2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
RCCD1A6NED2 AC018529.3-201ENST00000624212 2254 ntBASIC5.57□□□□□ -1.52
RCCD1A6NED2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.56□□□□□ -1.52
RCCD1A6NED2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.56□□□□□ -1.52
RCCD1A6NED2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RCCD1A6NED2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RCCD1A6NED2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.56□□□□□ -1.52
RCCD1A6NED2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
RCCD1A6NED2 RNA5SP46-201ENST00000362370 120 ntBASIC5.56□□□□□ -1.52
RCCD1A6NED2 RNU6-1272P-201ENST00000362776 107 ntBASIC5.56□□□□□ -1.52
RCCD1A6NED2 Y_RNA.71-201ENST00000362892 104 ntBASIC5.56□□□□□ -1.52
RCCD1A6NED2 Y_RNA.595-201ENST00000410403 105 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms