Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPS29P27-201ENST00000463711 170 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 RPL7AP28-201ENST00000464513 571 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 RN7SL97P-201ENST00000486780 299 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 RPS23P5-201ENST00000495419 428 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 GZMAP1-201ENST00000503054 631 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 HMGB1P22-201ENST00000505315 124 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 AC004024.1-201ENST00000549244 247 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 SNRPGP15-201ENST00000600149 222 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 AC006557.5-201ENST00000603126 811 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 AC009779.6-201ENST00000603972 165 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 MIR7154-201ENST00000620673 73 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHISA3A0PJX4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SHISA3A0PJX4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHISA3A0PJX4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.15□□□□□ -1.74
SHISA3A0PJX4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHISA3A0PJX4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHISA3A0PJX4 Z73965.1-201ENST00000623412 2297 ntBASIC4.15□□□□□ -1.74
SHISA3A0PJX4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHISA3A0PJX4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
SHISA3A0PJX4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.15□□□□□ -1.74
SHISA3A0PJX4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 RNU6-708P-201ENST00000384217 107 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 SNORA12.2-201ENST00000391040 156 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 RPS29P13-201ENST00000402041 169 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 CFL1P1-202ENST00000432948 411 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 AL513124.1-201ENST00000450410 614 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 RPL23AP24-201ENST00000458203 385 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 RNU5B-3P-201ENST00000516601 115 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 SNORA31.19-201ENST00000517079 126 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 RN7SKP92-201ENST00000517266 244 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 IGKV2-23-201ENST00000518729 323 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 AC022080.3-201ENST00000544433 482 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 IMMP1LP3-201ENST00000604197 224 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 SDR42E1P1-201ENST00000611327 477 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 AC027309.3-201ENST00000623419 351 ntBASIC4.15□□□□□ -1.75
SHISA3A0PJX4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
SHISA3A0PJX4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 DDX18P3-201ENST00000404856 2007 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 SNORD81.1-201ENST00000363064 77 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 RNU1-43P-201ENST00000365052 165 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 RNA5SP455-201ENST00000365190 119 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.352-201ENST00000365439 102 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.439-201ENST00000384119 94 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 RNU6-1181P-201ENST00000384191 106 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 RNU6-166P-201ENST00000384371 107 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 RNY3P4-201ENST00000384428 101 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 SNORD115-46-201ENST00000390982 71 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 MTND5P15-201ENST00000434246 349 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 BX679664.1-201ENST00000434429 253 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 AL078601.1-201ENST00000444542 271 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 ANP32BP2-201ENST00000454525 545 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 snoU13.24-201ENST00000458998 104 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 SNORD108-201ENST00000459332 71 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 RN7SL30P-201ENST00000488416 306 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 RNU6-377P-201ENST00000515965 102 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 RNA5SP34-201ENST00000516887 130 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 AC093023.1-201ENST00000547375 507 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 EDDM3DP-201ENST00000554692 434 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 HMGB1P14-201ENST00000557424 591 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 AC011487.3-201ENST00000593607 453 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 RPL7P50-201ENST00000600588 727 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 AC090132.2-201ENST00000615881 347 ntBASIC4.14□□□□□ -1.75
SHISA3A0PJX4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHISA3A0PJX4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms