Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 AC032011.1-201ENST00000611703 1549 ntBASIC3.65□□□□□ -1.83
CCDC187A0A096LP49 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 Y_RNA.157-201ENST00000363638 102 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 DEFB109C-201ENST00000382575 264 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 DEFB109B-201ENST00000382656 264 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 SNORA24.1-201ENST00000384401 135 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 MIR606-201ENST00000384851 96 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AL122016.1-201ENST00000403365 367 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AL354719.1-201ENST00000406535 843 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AC114491.1-201ENST00000416095 246 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 MTCO3P46-201ENST00000425787 232 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 RPL7L1P10-201ENST00000427790 463 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 MRPL50P4-201ENST00000446432 475 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AC073415.1-201ENST00000449240 153 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 CYCSP35-201ENST00000451978 304 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 HMGN2P7-201ENST00000456186 273 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 RNA5SP401-201ENST00000515920 127 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 RN7SKP258-201ENST00000517151 304 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AP006587.4-201ENST00000526053 529 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AC103843.2-201ENST00000530523 682 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AC011611.1-201ENST00000552179 197 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AL355836.1-201ENST00000555951 870 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 MED28P6-201ENST00000558776 231 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AC005951.2-201ENST00000576282 495 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 LINC02471-203ENST00000641941 4752 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AC004972.1-201ENST00000623934 2209 ntBASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CCDC187A0A096LP49 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 Y_RNA.67-201ENST00000362870 100 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 RNU6-61P-201ENST00000365528 109 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 RNU6-946P-201ENST00000383878 107 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 Y_RNA.431-201ENST00000384086 102 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 Y_RNA.474-201ENST00000384341 102 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 SNORA75.4-201ENST00000391278 119 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 RNU6-387P-201ENST00000411331 105 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC018630.2-202ENST00000422992 927 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 HMGB3P22-202ENST00000451823 572 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC017037.1-201ENST00000508460 471 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC108078.2-201ENST00000510750 236 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 NDUFB4P9-201ENST00000511646 388 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC112206.3-201ENST00000514578 389 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 SNORD60.2-201ENST00000516883 86 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 RNA5SP503-201ENST00000517047 117 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AL121821.2-201ENST00000556081 394 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 MIR3921-201ENST00000577308 85 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 MIR3200-201ENST00000580767 85 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 MIR5195-201ENST00000583555 115 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 MIR3922-201ENST00000585192 84 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AP001029.3-201ENST00000588063 596 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC012531.5-201ENST00000611375 151 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC138305.3-201ENST00000624988 240 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 MIR1302-1-201ENST00000637932 143 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms