Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 AC107952.2-201ENST00000606048 486 ntBASIC2.72□□□□□ -1.97
USP16Q9Y5T5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.72□□□□□ -1.97
USP16Q9Y5T5 AP000254.1-201ENST00000609934 520 ntBASIC2.72□□□□□ -1.97
USP16Q9Y5T5 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.72□□□□□ -1.97
USP16Q9Y5T5 AL450472.3-201ENST00000615578 367 ntBASIC2.72□□□□□ -1.97
USP16Q9Y5T5 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.72□□□□□ -1.97
USP16Q9Y5T5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
USP16Q9Y5T5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
USP16Q9Y5T5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 RNA5SP99-201ENST00000364020 114 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 RNU6-723P-201ENST00000383973 107 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 RNU1-138P-201ENST00000384093 164 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 UBE2FP3-201ENST00000436366 524 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 MTCO1P27-201ENST00000448269 226 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 AC009961.3-201ENST00000449832 765 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 AL031183.1-201ENST00000457667 207 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 RPL31P60-201ENST00000478450 367 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 RPL38P4-201ENST00000502376 214 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 AC109464.2-201ENST00000510242 943 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 SNORA3.4-201ENST00000515969 96 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 SNORA31.11-201ENST00000516528 139 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 AC008443.7-201ENST00000622195 246 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 PCMTD1P7-201ENST00000634506 357 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 FO624990.1-201ENST00000636373 85 ntBASIC2.71□□□□□ -1.98
USP16Q9Y5T5 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
USP16Q9Y5T5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 Y_RNA.18-201ENST00000362461 102 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 RNU6-853P-201ENST00000364306 107 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 U8.13-201ENST00000390842 128 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 MIR1305-201ENST00000408300 86 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 RPL7L1P10-201ENST00000427790 463 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC092573.2-201ENST00000434546 243 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC090774.1-201ENST00000435925 246 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AL354941.1-201ENST00000438600 464 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 RPL26P6-201ENST00000440913 438 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 HMGN2P23-201ENST00000456759 269 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC108210.2-201ENST00000503681 201 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC022447.3-201ENST00000506865 495 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AP003497.1-201ENST00000528472 562 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC136618.2-201ENST00000575091 400 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 LRRC37A5P-203ENST00000580181 585 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC013244.3-201ENST00000605614 388 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC004067.1-201ENST00000608733 700 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC103710.2-201ENST00000609912 942 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USP16Q9Y5T5 AC012321.1-201ENST00000561622 1588 ntBASIC2.7□□□□□ -1.98
USP16Q9Y5T5 ZNF519P1-201ENST00000449011 1626 ntBASIC2.69□□□□□ -1.98
USP16Q9Y5T5 RNU6-223P-201ENST00000362830 107 ntBASIC2.69□□□□□ -1.98
USP16Q9Y5T5 SNORA48.3-201ENST00000391081 134 ntBASIC2.69□□□□□ -1.98
USP16Q9Y5T5 PIGPP2-201ENST00000411569 458 ntBASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AL139156.1-201ENST00000412785 841 ntBASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.69□□□□□ -1.98
USP16Q9Y5T5 OR4K11P-201ENST00000431829 904 ntBASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AL591719.1-201ENST00000444669 744 ntBASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.69□□□□□ -1.98
USP16Q9Y5T5 HMGB1P36-201ENST00000487709 576 ntBASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AC147055.4-201ENST00000504399 745 ntBASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AP003461.1-201ENST00000528866 78 ntBASIC2.69□□□□□ -1.98
USP16Q9Y5T5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.69□□□□□ -1.98
USP16Q9Y5T5 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.69□□□□□ -1.98
USP16Q9Y5T5 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.69□□□□□ -1.98
USP16Q9Y5T5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.69□□□□□ -1.98
USP16Q9Y5T5 NUTF2P8-201ENST00000604593 363 ntBASIC2.69□□□□□ -1.98
USP16Q9Y5T5 HSPE1P7-201ENST00000604681 321 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms