Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.79□□□□□ -1.48
GTF3C3Q9Y5Q9 MIR7109-201ENST00000613748 65 ntBASIC5.79□□□□□ -1.48
GTF3C3Q9Y5Q9 AL353746.1-201ENST00000566293 6881 ntBASIC5.79□□□□□ -1.48
GTF3C3Q9Y5Q9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GTF3C3Q9Y5Q9 ADAM3A-203ENST00000461344 2157 ntBASIC5.79□□□□□ -1.48
GTF3C3Q9Y5Q9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 MFSD8-216ENST00000641147 4009 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 RNU1-18P-201ENST00000363062 164 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 RNU6-898P-201ENST00000365627 104 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 Z98749.2-208ENST00000381646 500 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 Y_RNA.460-201ENST00000384255 102 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 Y_RNA.535-201ENST00000384612 99 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 ATG3P1-201ENST00000419507 911 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 MTCO2P27-201ENST00000420740 428 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 AC093151.1-201ENST00000427711 313 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 AL121776.1-201ENST00000429337 372 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 AC124916.1-201ENST00000444020 547 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 AC125238.1-201ENST00000448842 249 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 NIPA2P5-201ENST00000452282 464 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 RPL23AP45-201ENST00000476406 468 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 RN7SL547P-201ENST00000490793 290 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 RNA5SP473-201ENST00000516402 125 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 Y_RNA.687-201ENST00000516558 91 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 AC016727.1-205ENST00000605437 569 ntBASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
GTF3C3Q9Y5Q9 AC010680.1-201ENST00000590024 3590 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 Y_RNA.67-201ENST00000362870 100 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 RNU6-1297P-201ENST00000384415 104 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 DDX39BP1-205ENST00000422507 192 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 RPL7P37-201ENST00000425095 738 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 CYCSP32-201ENST00000440548 321 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 HMGN2P10-201ENST00000448085 265 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AL031274.1-201ENST00000450334 232 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AC092001.1-201ENST00000453012 261 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 RN7SL93P-201ENST00000463035 293 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 RN7SL222P-201ENST00000476452 299 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 RN7SL170P-201ENST00000487098 295 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 RN7SL184P-201ENST00000488308 297 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 NDUFA5P12-201ENST00000503796 343 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 RNU6-559P-201ENST00000516151 98 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AC068790.4-201ENST00000602474 263 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AL670379.10-201ENST00000604330 253 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 ELOCP5-201ENST00000604924 333 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AC110741.2-201ENST00000605278 268 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AL670379.9-201ENST00000605428 253 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AC123912.5-201ENST00000605470 343 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 FAM27B-201ENST00000610601 213 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 AC073593.1-201ENST00000624500 411 ntBASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.77□□□□□ -1.49
GTF3C3Q9Y5Q9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 SNORD62.1-201ENST00000362541 86 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 SNORA17.1-201ENST00000362945 126 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 RNU6-95P-201ENST00000384697 107 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 AC087650.1-201ENST00000431445 468 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 RN7SL168P-201ENST00000463821 279 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 HMGN2P13-201ENST00000476476 274 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 RPS29P20-201ENST00000489592 171 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 RN7SL649P-201ENST00000496974 275 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 AC021739.1-201ENST00000559631 174 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 MIR5690-201ENST00000583739 73 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 MIR4719-201ENST00000585233 84 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 AC090574.1-201ENST00000623186 233 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 AC006504.1-201ENST00000562493 3666 ntBASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
GTF3C3Q9Y5Q9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms