Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 AL137141.1-201ENST00000624622 4836 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 AL512633.1-201ENST00000399931 655 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 AL355497.1-201ENST00000406262 551 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 RN7SKP151-201ENST00000410230 316 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 RNA5SP475-201ENST00000410568 110 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 RPL35AP31-201ENST00000418340 337 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 OR2AM1P-201ENST00000422137 422 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 AL353748.1-201ENST00000440753 474 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 AL158147.1-201ENST00000443970 75 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 RPL10P17-201ENST00000453852 316 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 PPIAP21-201ENST00000464473 501 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 RN7SL591P-201ENST00000496150 292 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 AC090142.3-201ENST00000519012 385 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 SNORD95-201ENST00000579879 68 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 U73479.1-201ENST00000618062 168 ntBASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 AC099654.7-201ENST00000635788 2127 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 AC093535.2-201ENST00000624769 2326 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RNA5SP375-201ENST00000362975 119 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU105B-201ENST00000364478 208 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU6-728P-201ENST00000365375 104 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 MIR526A2-201ENST00000390198 65 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU6-1228P-201ENST00000391014 107 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU6-837P-201ENST00000391056 108 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RN7SKP53-201ENST00000411337 315 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 Y_RNA.630-201ENST00000411370 108 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 AL096829.1-201ENST00000413677 457 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RPL39P29-201ENST00000447779 157 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU6-1061P-201ENST00000516530 99 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 Y_RNA.692-201ENST00000516627 105 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 MIR3176-201ENST00000582210 90 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RNA5SP440-201ENST00000612665 119 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RN7SL787P-201ENST00000613000 284 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 AC024581.2-201ENST00000619986 252 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 CR381572.2-201ENST00000624852 397 ntBASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA4Q9Y5G9 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PCDHGA4Q9Y5G9 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.84□□□□□ -1.48
PCDHGA4Q9Y5G9 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 RNU6-880P-201ENST00000384526 107 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 AL591034.1-201ENST00000407447 340 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 U3.37-201ENST00000408528 213 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 U3.40-201ENST00000408706 208 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 AC098614.2-201ENST00000426040 255 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 GPM6BP3-201ENST00000442797 145 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 AC100832.1-201ENST00000471945 383 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 RN7SL193P-201ENST00000491708 276 ntBASIC5.83□□□□□ -1.48
PCDHGA4Q9Y5G9 RNA5SP230-201ENST00000517039 122 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms