Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AC026726.1-201ENST00000512859 601 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 IGKV2-23-201ENST00000518729 323 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 FAM60DP-201ENST00000524174 632 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AC020914.4-201ENST00000597690 277 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AL022345.1-201ENST00000607292 135 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AC040168.1-201ENST00000623594 991 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AL672296.1-201ENST00000427780 2158 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 TAB3P1-202ENST00000452645 1634 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 Y_RNA.315-201ENST00000365117 102 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-516P-201ENST00000411381 104 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 RPS7P15-201ENST00000415804 584 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 RPL21P66-201ENST00000426566 466 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 HMGN2P31-201ENST00000432430 273 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 ATP5HP2-201ENST00000433885 485 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 BRK1P2-201ENST00000442875 223 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AC016696.1-201ENST00000446949 318 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 SNORD19B-201ENST00000459623 84 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 RPL23AP11-201ENST00000475260 469 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AC096576.1-201ENST00000489014 359 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 FAM206BP-201ENST00000510179 541 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 U3.45-201ENST00000607547 219 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AC069200.1-201ENST00000609511 323 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AC006329.2-201ENST00000611491 394 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 MTND4P14-201ENST00000435799 1354 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 MTND4P27-201ENST00000450813 1354 ntBASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.37□□□□□ -1.71
CTDP1Q9Y5B0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AL136164.4-201ENST00000625013 2135 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AL139276.1-201ENST00000311910 1001 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 RNA5SP119-201ENST00000362715 117 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-179P-201ENST00000363350 107 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-432P-201ENST00000384196 109 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-339P-201ENST00000384310 107 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 RNU2-36P-201ENST00000410361 191 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 RNA5SP44-201ENST00000410446 133 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 ARL5AP1-201ENST00000418991 388 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 MTND2P23-201ENST00000422990 651 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AC018630.2-202ENST00000422992 927 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 RPS3AP46-201ENST00000448352 682 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 snoU13.22-201ENST00000459428 104 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 MTND4P17-201ENST00000470444 350 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 MTND5P5-201ENST00000503764 376 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 RN7SKP13-201ENST00000515933 244 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-327P-201ENST00000516270 127 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 MIR2114-201ENST00000516645 80 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-64P-201ENST00000517119 105 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 SETP7-201ENST00000552169 453 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AL360157.1-201ENST00000565962 87 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 MIR4703-201ENST00000577728 79 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AL360085.1-201ENST00000604713 532 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AC090971.5-201ENST00000621102 293 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 AL133216.2-202ENST00000634512 349 ntBASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTDP1Q9Y5B0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms