Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 RPL7P26-201ENST00000333817 754 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 RNU6-1284P-201ENST00000363701 100 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 SNORA5B-201ENST00000363786 132 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 Y_RNA.505-201ENST00000384489 102 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 RN7SKP140-201ENST00000411196 284 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AF274854.1-201ENST00000413236 615 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AC093106.2-201ENST00000428212 385 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 MTCO2P11-201ENST00000431069 680 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 MTND1P34-201ENST00000438556 671 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 RPS12P18-201ENST00000442381 270 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AC132479.1-201ENST00000449160 144 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 MTND2P24-201ENST00000453434 806 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 RN7SL330P-201ENST00000469709 307 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 RPL9P33-201ENST00000484311 566 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 RPL9P6-201ENST00000492764 598 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AC108078.1-201ENST00000508073 725 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AL359273.1-201ENST00000510918 627 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AC090572.1-201ENST00000519251 160 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 HMGB1P41-201ENST00000520234 440 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 FAM92A1P1-201ENST00000528023 890 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AL355836.1-201ENST00000555951 870 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AL845331.3-202ENST00000562856 261 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AP001029.3-201ENST00000588063 596 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AC080078.2-201ENST00000603766 501 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AC099654.12-201ENST00000639868 649 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 AL672296.1-201ENST00000427780 2158 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 CR848007.1-201ENST00000442354 1699 ntBASIC3.16□□□□□ -1.9
YIPF1Q9Y548 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
YIPF1Q9Y548 RNU1-75P-201ENST00000347264 129 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 RNU5E-6P-201ENST00000365574 115 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 Y_RNA.516-201ENST00000384541 124 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 MIR514A1-201ENST00000385133 98 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 Y_RNA.599-201ENST00000410489 109 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AL031779.1-201ENST00000415663 330 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 YPEL5P1-201ENST00000419731 367 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 RPL7L1P10-201ENST00000427790 463 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 RPL23AP30-201ENST00000432419 501 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AL135938.1-201ENST00000443141 297 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 HMGB3P8-201ENST00000449709 577 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AC083906.5-201ENST00000503722 328 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AC105914.1-201ENST00000511798 226 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AC091826.1-201ENST00000514065 313 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 RNA5SP217-201ENST00000515959 91 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AC016957.1-201ENST00000534895 309 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AC055876.1-202ENST00000567053 138 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 DEFB131E-202ENST00000602581 683 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 DPPA3P3-201ENST00000603842 430 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AC007684.1-201ENST00000609671 477 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 AL158209.2-201ENST00000619266 216 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 MIR7153-201ENST00000637758 57 ntBASIC3.15□□□□□ -1.91
YIPF1Q9Y548 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
YIPF1Q9Y548 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 RNU6-188P-201ENST00000364207 107 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 RNU6-701P-201ENST00000384059 107 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 Y_RNA.500-201ENST00000384466 111 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 RNU6-456P-201ENST00000384493 107 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 UBE2D3P2-201ENST00000424409 445 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 OR2AS1P-201ENST00000427827 319 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 MTND1P1-201ENST00000445453 368 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 RPS20P20-201ENST00000460498 340 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 RPS27AP1-201ENST00000475545 471 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms