Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS9D1Q9Y2B5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS9D1Q9Y2B5 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.65□□□□□ -1.5
VPS9D1Q9Y2B5 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS9D1Q9Y2B5 MIR6862-1-201ENST00000613016 70 ntBASIC5.65□□□□□ -1.5
VPS9D1Q9Y2B5 MIR6862-2-201ENST00000614755 70 ntBASIC5.65□□□□□ -1.5
VPS9D1Q9Y2B5 CENPCP1-201ENST00000533085 2578 ntBASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 AC093671.1-201ENST00000624981 2929 ntBASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 AC010329.2-201ENST00000595195 2737 ntBASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 AL022311.1-201ENST00000623726 19416 ntBASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 AC010329.5-201ENST00000623497 2174 ntBASIC5.65□□□□□ -1.51
VPS9D1Q9Y2B5 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 AL159987.1-201ENST00000347911 293 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 SNORD114-19-201ENST00000363072 75 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 U3.7-201ENST00000363668 216 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 RNU6-873P-201ENST00000363833 107 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 RNU6-728P-201ENST00000365375 104 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 RNU6-19P-201ENST00000384718 107 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 SNORD72-201ENST00000390994 80 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 AC005522.1-201ENST00000395416 346 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 AL592291.1-201ENST00000403830 352 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 RNU6-712P-201ENST00000410558 100 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 BX276092.6-201ENST00000430476 250 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 AC138761.5-201ENST00000433967 325 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 LINC02210-201ENST00000444561 288 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 BX276092.8-201ENST00000455722 250 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 RN7SL197P-201ENST00000466981 299 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 AC007686.1-201ENST00000488511 463 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 FTH1P11-201ENST00000517577 551 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 SCARNA4-202ENST00000625402 129 ntBASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS9D1Q9Y2B5 AL360270.2-201ENST00000562952 5985 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 MIR375-201ENST00000362103 64 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 RNU6-106P-201ENST00000384405 107 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 RNU6-1228P-201ENST00000391014 107 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 CYCSP10-201ENST00000417973 294 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 RPS29P14-201ENST00000431518 171 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 RN7SL188P-201ENST00000469842 285 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 RNU6-561P-201ENST00000516222 102 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 RNA5SP271-201ENST00000516700 88 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 AC006380.1-201ENST00000603598 186 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 AC062037.1-201ENST00000605302 128 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 MIR4496-201ENST00000635896 61 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 LINC01963-201ENST00000562038 3148 ntBASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS9D1Q9Y2B5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
VPS9D1Q9Y2B5 AC026523.2-201ENST00000625039 7739 ntBASIC5.62□□□□□ -1.51
VPS9D1Q9Y2B5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS9D1Q9Y2B5 AP005435.3-201ENST00000531260 3198 ntBASIC5.62□□□□□ -1.51
VPS9D1Q9Y2B5 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS9D1Q9Y2B5 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VPS9D1Q9Y2B5 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS9D1Q9Y2B5 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
VPS9D1Q9Y2B5 RN7SKP185-201ENST00000362813 326 ntBASIC5.62□□□□□ -1.51
VPS9D1Q9Y2B5 RNA5SP30-201ENST00000365552 115 ntBASIC5.62□□□□□ -1.51
VPS9D1Q9Y2B5 RNU6-49P-201ENST00000384256 107 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms