Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 HSPA8P1-201ENST00000425843 1833 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 RNU6-306P-201ENST00000384617 107 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 RNA5SP332-201ENST00000391063 115 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 MIR937-201ENST00000401271 86 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 RPS16P5-201ENST00000406501 404 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 RNU6-985P-201ENST00000410182 104 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 Z99755.1-201ENST00000414048 380 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 MTCO1P39-201ENST00000426148 480 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 RPL23AP1-201ENST00000428990 471 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 AC073063.1-201ENST00000434352 607 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 AC012671.1-201ENST00000451912 203 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 RPL9P32-201ENST00000464118 620 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 HSPE1P6-201ENST00000479457 291 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 SNORA25.10-201ENST00000515926 124 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 Y_RNA.661-201ENST00000516003 99 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 SNRPGP16-201ENST00000533275 226 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 AL117187.1-201ENST00000555482 181 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 AL161423.1-201ENST00000613700 262 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 AL732372.2-225ENST00000642124 456 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 ZNF285B-201ENST00000561698 1767 ntBASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.26□□□□□ -1.57
BRPF3Q9ULD4 RAD17P1-201ENST00000418130 2042 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 Y_RNA.534-201ENST00000384599 112 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 SDHCP2-201ENST00000398565 501 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 MTCYBP10-201ENST00000424905 650 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 HMGB1P12-201ENST00000438594 598 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 RNU7-138P-201ENST00000459479 64 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AC103987.1-201ENST00000473394 348 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AC026979.1-201ENST00000492525 396 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 PARP4P3-201ENST00000510265 317 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AC092436.3-201ENST00000511788 257 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 SNORA31.20-201ENST00000517111 133 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 CDH12P4-201ENST00000517835 295 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 CDH12P3-201ENST00000517935 295 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 CDH12P1-201ENST00000518435 295 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AP003122.3-201ENST00000526316 255 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AC034102.8-201ENST00000615146 484 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 AC091905.2-201ENST00000623143 306 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 ZNF807-201ENST00000328088 1707 ntBASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRPF3Q9ULD4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 Y_RNA.364-201ENST00000365532 101 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 RNU1-44P-201ENST00000384453 163 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 AC097374.1-203ENST00000400783 485 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 RNU6-293P-201ENST00000411259 106 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 RNU2-71P-201ENST00000411395 189 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 USP9YP30-201ENST00000430729 455 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 SNRPEP4-201ENST00000435815 279 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 ARL2BPP10-201ENST00000446487 531 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 AL360271.2-201ENST00000447710 161 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 BTF3P15-201ENST00000455606 336 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 SNORD5.1-201ENST00000458800 75 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 CEACAMP10-202ENST00000495431 496 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 AL592156.1-201ENST00000508758 304 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 RNU6-470P-201ENST00000515954 104 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 RNU6-927P-201ENST00000516199 100 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 AP000827.1-201ENST00000527814 258 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 AC010653.1-201ENST00000571108 881 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 AL160290.3-201ENST00000604869 165 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 AC005014.2-201ENST00000607795 599 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 MAPK10-263ENST00000641052 4307 ntBASIC5.24□□□□□ -1.57
BRPF3Q9ULD4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
BRPF3Q9ULD4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRPF3Q9ULD4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.23□□□□□ -1.57
BRPF3Q9ULD4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.23□□□□□ -1.57
BRPF3Q9ULD4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.23□□□□□ -1.57
BRPF3Q9ULD4 RNU5A-1-201ENST00000362698 116 ntBASIC5.23□□□□□ -1.57
BRPF3Q9ULD4 RNU6-173P-201ENST00000364215 104 ntBASIC5.23□□□□□ -1.57
BRPF3Q9ULD4 RNU6-629P-201ENST00000384061 103 ntBASIC5.23□□□□□ -1.57
BRPF3Q9ULD4 RNU1-89P-201ENST00000384592 164 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms