Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 PPP1R11P2-201ENST00000423543 382 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 SUMO1P4-201ENST00000429430 302 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 MTND2P4-201ENST00000445034 1004 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC055855.1-201ENST00000489563 579 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC135721.1-201ENST00000497954 479 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 RNA5SP282-201ENST00000516355 108 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 DEFB108D-201ENST00000527787 222 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AP001646.1-201ENST00000527936 915 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AP002748.2-201ENST00000528671 348 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC123904.2-201ENST00000548059 300 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC108747.1-201ENST00000609508 535 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC107294.1-201ENST00000609524 467 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 OR10AB1P-201ENST00000609613 938 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC073114.1-201ENST00000612027 490 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC107871.2-201ENST00000612894 502 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AL159972.1-201ENST00000625150 448 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AC019226.1-201ENST00000625666 515 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 RNU5E-5P-201ENST00000365379 116 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 MIR627-201ENST00000384979 97 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 CYCSP46-201ENST00000423569 204 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AL590365.1-201ENST00000450788 243 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 GSTA11P-201ENST00000452866 669 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 MTND1P9-201ENST00000453775 944 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 SNORA70.16-201ENST00000516390 95 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 RNU6-1003P-201ENST00000517099 105 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AL356057.1-201ENST00000533798 831 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC012414.6-201ENST00000568241 401 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 MIR5194-201ENST00000582634 120 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC008739.2-201ENST00000597006 317 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC010620.1-201ENST00000601088 1102 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AP001981.2-201ENST00000603241 418 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC116312.1-201ENST00000606841 314 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC239868.4-201ENST00000608318 671 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC012360.2-201ENST00000609349 391 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 AC009268.2-201ENST00000621925 457 ntBASIC2.57□□□□□ -2
APOBEC3BQ9UH17 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOBEC3BQ9UH17 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 U3.4-201ENST00000363352 213 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 RNU6-432P-201ENST00000384196 109 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 MIR493-201ENST00000385254 89 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 RPLP0P7-201ENST00000416050 667 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 UBE2FP1-201ENST00000416536 447 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 USP9YP13-201ENST00000417797 480 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AL356583.2-201ENST00000426536 280 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AC244035.1-201ENST00000430042 390 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 RPL22P17-201ENST00000438729 315 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AL049734.2-201ENST00000441066 616 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AL592447.1-201ENST00000447592 540 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AL049874.1-201ENST00000489560 388 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms