Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 RPL21P109-201ENST00000422213 475 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 RPL7P28-201ENST00000437739 740 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 AL359073.1-201ENST00000448036 403 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 NUTF2P3-201ENST00000448540 384 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 RPL21P41-201ENST00000459863 264 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 RPS29P19-201ENST00000479709 171 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 AC092451.1-201ENST00000480211 153 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 MIR3939-201ENST00000582614 106 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 MIR432-201ENST00000606207 94 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 ATP5A1P2-202ENST00000616464 443 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 MIR6830-201ENST00000636015 70 ntBASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PPARGC1AQ9UBK2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.34□□□□□ -1.72
PPARGC1AQ9UBK2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PPARGC1AQ9UBK2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PPARGC1AQ9UBK2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
PPARGC1AQ9UBK2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PPARGC1AQ9UBK2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
PPARGC1AQ9UBK2 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.34□□□□□ -1.72
PPARGC1AQ9UBK2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 Y_RNA.28-201ENST00000362554 111 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 Y_RNA.216-201ENST00000364205 93 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 SNORA22B-201ENST00000383876 138 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 MIR607-201ENST00000385241 96 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 PMCHL1-202ENST00000423102 261 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 COX6B1P7-201ENST00000430845 235 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 RPL23AP46-201ENST00000438548 490 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 AL359672.1-201ENST00000442302 409 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 TPT1P12-201ENST00000448968 492 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 AC117503.1-201ENST00000472241 394 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 RNU6-988P-201ENST00000519081 107 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 RNU6-323P-201ENST00000521915 107 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 AP004371.1-201ENST00000525240 214 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 OR5D17P-201ENST00000531492 978 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 CYCSP29-201ENST00000533731 318 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 AC012603.1-201ENST00000606424 528 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 MIR15A-201ENST00000607334 83 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 AC019193.3-201ENST00000609144 554 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 AC008121.3-201ENST00000618726 433 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 RMST_9.1-201ENST00000619945 193 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 MIR7702-201ENST00000621931 59 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 AC112200.1-201ENST00000625015 234 ntBASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PPARGC1AQ9UBK2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 KPNA2P1-201ENST00000458289 1591 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 RNU6-288P-201ENST00000363690 104 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 RNU6-371P-201ENST00000364283 108 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 RNU6-214P-201ENST00000384130 107 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 Y_RNA.534-201ENST00000384599 112 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 AL139039.1-201ENST00000401900 692 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 TXNP1-201ENST00000441872 371 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 RPL30P15-201ENST00000457129 321 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 RPL9P32-201ENST00000464118 620 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 TBCAP3-201ENST00000512475 312 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 RNU6-914P-201ENST00000516749 109 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 AC063950.1-201ENST00000552036 308 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms