Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 SNORA25.11-201ENST00000515935 105 ntBASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 RNU6-911P-201ENST00000516523 104 ntBASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 OR5D17P-201ENST00000531492 978 ntBASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 AC103996.1-201ENST00000555468 102 ntBASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 MIR5696-201ENST00000578474 85 ntBASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 RN7SL290P-201ENST00000578661 300 ntBASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CXXC1Q9P0U4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 SNORD46.1-201ENST00000364139 104 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 SNORA71.2-201ENST00000364941 134 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 Y_RNA.447-201ENST00000384184 113 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 SNORA40C-201ENST00000391285 128 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 RNU2-68P-201ENST00000410878 191 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 TMSB10P2-201ENST00000416049 131 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 AL159987.2-201ENST00000432754 307 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 AL078601.1-201ENST00000444542 271 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 ANP32BP2-201ENST00000454525 545 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 RNA5SP165-201ENST00000517142 115 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 AC091144.1-201ENST00000519573 138 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 HMGB1P14-201ENST00000557424 591 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 MIR5701-3-201ENST00000578890 82 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 MIR5701-1-201ENST00000585138 82 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 IPO5P1-202ENST00000600039 287 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 AL591034.3-201ENST00000605511 685 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 AC008962.1-201ENST00000605729 304 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 MIR5701-2-201ENST00000615634 82 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 AC008568.2-201ENST00000623862 2313 ntBASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXXC1Q9P0U4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AC010300.1-201ENST00000600671 5134 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 Y_RNA.552-201ENST00000384665 112 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AL353748.1-201ENST00000440753 474 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 RN7SL810P-201ENST00000493031 276 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 SNORA70.16-201ENST00000516390 95 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 RNU6-572P-201ENST00000516724 80 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 RNU6-612P-201ENST00000516909 102 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 RNU6-709P-201ENST00000517257 104 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 HSPE1P20-201ENST00000538133 289 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 TRAV28-201ENST00000557548 323 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AMZ2P1-203ENST00000565833 850 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 RN7SL176P-201ENST00000580352 264 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AL139395.1-201ENST00000603662 160 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 RAC1P9-201ENST00000604990 392 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AC091979.2-201ENST00000607514 214 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 SNX18P1Y-201ENST00000616231 511 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AC131238.1-201ENST00000617135 328 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AL159153.1-201ENST00000619688 317 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AC063976.2-201ENST00000425667 3556 ntBASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXXC1Q9P0U4 AC233263.6-201ENST00000631132 1963 ntBASIC5.05□□□□□ -1.6
CXXC1Q9P0U4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.05□□□□□ -1.6
CXXC1Q9P0U4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.05□□□□□ -1.6
CXXC1Q9P0U4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CXXC1Q9P0U4 SNORA7.2-201ENST00000364446 145 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms