Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ELOCP23-201ENST00000452014 332 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.21□□□□□ -1.74
VTA1Q9NP79 VN1R17P-201ENST00000472048 1090 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.21□□□□□ -1.74
VTA1Q9NP79 AL049874.1-201ENST00000489560 388 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 Y_RNA.689-201ENST00000516589 107 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 MIR2114-201ENST00000516645 80 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 AC135001.1-201ENST00000544546 283 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 PSMA3P-201ENST00000555485 635 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
VTA1Q9NP79 AL137849.1-201ENST00000604767 169 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 HMGB1P50-201ENST00000605814 607 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 AC103858.2-201ENST00000621471 543 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.21□□□□□ -1.74
VTA1Q9NP79 AC119674.1-207ENST00000641355 633 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VTA1Q9NP79 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.21□□□□□ -1.74
VTA1Q9NP79 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.21□□□□□ -1.74
VTA1Q9NP79 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VTA1Q9NP79 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.2□□□□□ -1.74
VTA1Q9NP79 UBE3AP2-201ENST00000429033 2259 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VTA1Q9NP79 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
VTA1Q9NP79 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VTA1Q9NP79 Y_RNA.70-201ENST00000362886 110 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 RNU6-797P-201ENST00000363101 109 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 RNA5SP424-201ENST00000390988 115 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 AL162578.1-201ENST00000406202 378 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 MIR1183-201ENST00000408856 89 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 RN7SKP32-201ENST00000410167 303 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.2□□□□□ -1.74
VTA1Q9NP79 RPS3AP12-201ENST00000443616 753 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 Y_RNA.654-201ENST00000497848 106 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC091951.2-201ENST00000500762 203 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC074250.1-201ENST00000511117 192 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC104136.1-201ENST00000512969 394 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 RNA5SP291-201ENST00000517222 105 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 RANP9-201ENST00000519957 271 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC090877.1-201ENST00000561418 344 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
VTA1Q9NP79 MIR3690-201ENST00000580266 75 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 AL670379.4-201ENST00000605279 254 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC022893.3-201ENST00000607665 437 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC093913.1-201ENST00000614178 329 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC104985.2-201ENST00000620598 500 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.2□□□□□ -1.74
VTA1Q9NP79 AC100810.6-201ENST00000638068 285 ntBASIC4.2□□□□□ -1.74
VTA1Q9NP79 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VTA1Q9NP79 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
VTA1Q9NP79 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
VTA1Q9NP79 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VTA1Q9NP79 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VTA1Q9NP79 OR4G2P-202ENST00000641004 1759 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 IPO8P1-201ENST00000455509 3109 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTA1Q9NP79 FAM35DP-201ENST00000323387 2712 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 LINC02471-203ENST00000641941 4752 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 AC090740.1-201ENST00000623193 2262 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 AC073346.2-201ENST00000624724 2058 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 RNU6-600P-201ENST00000362524 99 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 U3.12-201ENST00000364498 214 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTA1Q9NP79 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 RPL35AP12-201ENST00000425362 338 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 SNRPEP8-201ENST00000442866 260 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 AC093019.1-201ENST00000443135 252 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 RPL7P12-201ENST00000446719 750 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 RPS15AP34-201ENST00000487776 387 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 RBBP4P6-201ENST00000508098 202 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 SNORA70.16-201ENST00000516390 95 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 RNU6-143P-201ENST00000516942 93 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 AC106782.4-201ENST00000568264 210 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 AL158032.1-201ENST00000605401 106 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 AL022345.1-201ENST00000607292 135 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 AC009570.1-201ENST00000609599 745 ntBASIC4.19□□□□□ -1.74
VTA1Q9NP79 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTA1Q9NP79 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.19□□□□□ -1.74
VTA1Q9NP79 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTA1Q9NP79 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTA1Q9NP79 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms