Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 Y_RNA.419-201ENST00000384041 102 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 MIR493-201ENST00000385254 89 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 RNU6-1197P-201ENST00000391183 107 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 RNU6-607P-201ENST00000411283 108 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AL353621.1-201ENST00000418219 243 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 MTCO2P12-201ENST00000427426 682 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 FABP5P14-201ENST00000437273 393 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 MTND1P17-201ENST00000448961 204 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 SNRPGP5-201ENST00000456003 220 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 RN7SL860P-201ENST00000473738 223 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 MTND3P25-201ENST00000509243 135 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AC100770.1-201ENST00000532310 322 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 CYCSP29-201ENST00000533731 318 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 IMMP1LP2-201ENST00000552954 492 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AC136624.4-201ENST00000573044 370 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 LRRC37A5P-203ENST00000580181 585 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AL161729.3-201ENST00000603533 673 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AL590392.1-201ENST00000604960 446 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 ATP5A1P2-202ENST00000616464 443 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AC010378.1-201ENST00000619270 362 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM39Q9HCM9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 MIR412-201ENST00000362142 91 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 RNU6-593P-201ENST00000364716 112 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 Y_RNA.482-201ENST00000384377 111 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 MIR513A2-201ENST00000385249 127 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 MTCYBP4-201ENST00000401524 249 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AL445189.1-201ENST00000405722 338 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AC091390.1-201ENST00000433904 331 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AL451050.1-201ENST00000450126 415 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 RPL30P5-201ENST00000494923 336 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AC104164.2-201ENST00000496953 495 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AC146944.2-203ENST00000502493 354 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AC139495.1-202ENST00000513164 354 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AC087369.1-201ENST00000520775 996 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AC026371.1-201ENST00000551867 419 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 HSPE1P5-201ENST00000561489 272 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 ZNF192P1-203ENST00000565888 810 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AC020910.2-201ENST00000603635 610 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 MIR6798-201ENST00000612887 67 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 MIR8059-201ENST00000620427 81 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 AC103858.2-201ENST00000621471 543 ntBASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM39Q9HCM9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 AL672296.1-201ENST00000427780 2158 ntBASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 RNU1-15P-201ENST00000353977 144 ntBASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 SNORD74.4-201ENST00000364129 80 ntBASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 AL391417.1-201ENST00000404100 426 ntBASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 RNU6-293P-201ENST00000411259 106 ntBASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 RPS15AP6-201ENST00000420703 385 ntBASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 RSL24D1P6-201ENST00000426934 401 ntBASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 TOMM20P4-201ENST00000427861 435 ntBASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 AC005534.2-201ENST00000431047 433 ntBASIC4.19□□□□□ -1.74
TRIM39Q9HCM9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms