Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL136372.1-201ENST00000403060 228 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC245054.2-201ENST00000415639 319 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AL158156.1-201ENST00000422509 473 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 TIMM9P3-201ENST00000428659 274 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 RPL7P54-201ENST00000438336 674 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 MTATP6P30-201ENST00000443540 664 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 UQCRHP3-201ENST00000451503 251 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 ELOCP23-201ENST00000452014 332 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC027673.1-201ENST00000456245 405 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 snoU13.4-201ENST00000458916 104 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 RN7SL75P-201ENST00000461926 281 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 HMGN2P13-201ENST00000476476 274 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 GMPSP1-201ENST00000514075 579 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 RNU6-410P-201ENST00000517006 107 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 OR4H12P-201ENST00000556269 907 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AL133241.1-201ENST00000556832 487 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC012182.1-201ENST00000570133 895 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AL133393.1-201ENST00000603277 287 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AL121992.2-201ENST00000606262 256 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 RNU6-50P-201ENST00000362356 103 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 Y_RNA.450-201ENST00000384198 113 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 U3.19-201ENST00000390893 196 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 RNU1-101P-201ENST00000391171 127 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AL357075.1-201ENST00000404107 726 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 RNA5SP120-201ENST00000410900 112 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 MTATP6P4-201ENST00000427725 675 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 HMGB3P12-201ENST00000438745 556 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 RPL26P6-201ENST00000440913 438 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC079781.2-201ENST00000446424 169 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 RPL23AP20-201ENST00000447965 421 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 RPS24P6-201ENST00000452670 400 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC006512.1-201ENST00000468816 291 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC006483.1-201ENST00000487308 313 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC109927.2-201ENST00000506416 303 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 RNU1-61P-201ENST00000516107 151 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 SNORA31.22-201ENST00000517204 135 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 OR5AQ1P-201ENST00000527596 927 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 HMGB1P33-201ENST00000563485 527 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC234778.2-201ENST00000566241 354 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC092325.1-201ENST00000566449 554 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 MIR3944-201ENST00000581277 108 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC105224.1-201ENST00000587055 421 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AL606834.2-201ENST00000602954 668 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 SRGNP1-201ENST00000603392 451 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC012443.1-201ENST00000605605 231 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 SNHG22-203ENST00000617833 660 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDH9Q9HC56 AC009812.4-201ENST00000569134 1805 ntBASIC3.26□□□□□ -1.89
PCDH9Q9HC56 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 RNU6-1097P-201ENST00000363586 107 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 RNU6-108P-201ENST00000365558 107 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 RNU6-483P-201ENST00000384088 108 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 MIR558-201ENST00000384920 94 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 SAR1AP2-201ENST00000392696 594 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC110754.1-201ENST00000399740 601 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AL591416.1-201ENST00000404015 867 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 USP9YP27-201ENST00000418455 438 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 SDCBPP3-201ENST00000419629 891 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms