Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 UBE2V2P2-201ENST00000587677 504 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC006023.2-201ENST00000609916 167 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 GABPAP-201ENST00000419271 1356 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 RNU6-552P-201ENST00000362869 119 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 RNU6-179P-201ENST00000363350 107 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 Y_RNA.157-201ENST00000363638 102 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 SNORD115-7-201ENST00000365306 82 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 RNU6-1029P-201ENST00000384109 107 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 SNORA9-201ENST00000384215 133 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 SNORA36C-201ENST00000384289 132 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 TXNP7-201ENST00000406296 293 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AC017079.2-201ENST00000416102 485 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AL121871.1-201ENST00000443413 436 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 ANP32BP2-201ENST00000454525 545 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 PMCHL2-203ENST00000457791 237 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 RN7SL293P-201ENST00000481765 281 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 RPL32P34-201ENST00000486380 400 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AC114786.4-201ENST00000508771 728 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AC004062.1-201ENST00000509926 645 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AC104619.4-201ENST00000510773 249 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 PSMA2P1-201ENST00000526365 646 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AC093012.1-202ENST00000549403 582 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 OR4H12P-201ENST00000556269 907 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 MIR4703-201ENST00000577728 79 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 MIR5047-201ENST00000579212 100 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 MIR3690-201ENST00000580266 75 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 MIR4425-201ENST00000580572 84 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AC018638.8-201ENST00000588755 281 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AL670379.6-201ENST00000603753 252 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AL670379.11-201ENST00000604059 253 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AC008162.1-201ENST00000604718 254 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AL670379.1-201ENST00000604752 252 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AL670379.5-201ENST00000605253 252 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AL670379.12-201ENST00000605291 253 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AL670379.8-201ENST00000605353 252 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AL670379.7-201ENST00000605823 252 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AC025034.2-201ENST00000623264 286 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 MIR4275-201ENST00000636486 87 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 U6.105-201ENST00000637379 88 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 AL137003.2-201ENST00000606924 2538 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP29Q9HBJ7 ASNSP3-201ENST00000451989 1306 ntBASIC3.68□□□□□ -1.82
USP29Q9HBJ7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 MTND4P12-201ENST00000498999 1377 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 MTCO1P12-201ENST00000414273 1543 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 RNA5SP51-201ENST00000364750 119 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 RNU4-20P-201ENST00000365601 151 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 RNU6-946P-201ENST00000383878 107 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 RNU6-701P-201ENST00000384059 107 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 MIR514A2-201ENST00000385131 88 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 MIR514A3-201ENST00000385132 88 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 UBE2V1P2-201ENST00000397758 440 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 RNU2-37P-201ENST00000410695 177 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 RNU6-193P-201ENST00000410977 107 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 RNU6-373P-201ENST00000411247 98 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 RNU2-71P-201ENST00000411395 189 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 DUTP6-201ENST00000425573 462 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 VDAC1P3-201ENST00000434069 851 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 AC024082.2-201ENST00000434771 238 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 AL162395.1-201ENST00000457882 422 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 RNU6-1073P-201ENST00000517182 106 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 RANP9-201ENST00000519957 271 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 AP006587.4-201ENST00000526053 529 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 AC026333.2-201ENST00000542164 106 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 MIR4424-201ENST00000585257 86 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 MIR7975-201ENST00000619350 68 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms