Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UPF2Q9HAU5 AC137800.2-201ENST00000574375 120 ntBASIC3.31□□□□□ -1.88
UPF2Q9HAU5 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.31□□□□□ -1.88
UPF2Q9HAU5 AC024153.1-201ENST00000603103 365 ntBASIC3.31□□□□□ -1.88
UPF2Q9HAU5 AC092954.2-201ENST00000609103 430 ntBASIC3.31□□□□□ -1.88
UPF2Q9HAU5 AC007684.1-201ENST00000609671 477 ntBASIC3.31□□□□□ -1.88
UPF2Q9HAU5 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.31□□□□□ -1.88
UPF2Q9HAU5 AC092794.1-201ENST00000612734 582 ntBASIC3.31□□□□□ -1.88
UPF2Q9HAU5 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.31□□□□□ -1.88
UPF2Q9HAU5 AC090617.7-201ENST00000623952 126 ntBASIC3.31□□□□□ -1.88
UPF2Q9HAU5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
UPF2Q9HAU5 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 FRG1BP-201ENST00000278882 761 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 Y_RNA.6-201ENST00000362350 114 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 Y_RNA.554-201ENST00000384672 102 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 MIR19A-201ENST00000384878 82 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 MIR34B-201ENST00000385076 84 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 U3.20-201ENST00000390909 217 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 FCF1P10-201ENST00000407590 479 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AC099677.1-201ENST00000420575 175 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 ISCA1P6-201ENST00000427740 390 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 RPL22P17-201ENST00000438729 315 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AC112653.1-201ENST00000443851 386 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 SSXP4-201ENST00000451349 245 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 RPS23P3-201ENST00000470993 430 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 Y_RNA.672-201ENST00000516289 104 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 SNORA74D-201ENST00000516404 141 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 RNU6-528P-201ENST00000516926 100 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 RN7SKP57-201ENST00000517248 293 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 BNIP3P22-201ENST00000593399 556 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AP000787.2-201ENST00000604432 568 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 RNU6-87P-201ENST00000607561 108 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AC068944.2-201ENST00000610373 403 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AL390240.1-201ENST00000612950 384 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AC138649.3-201ENST00000622154 254 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AC110994.2-201ENST00000635481 492 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 FARSBP1-201ENST00000435808 1778 ntBASIC3.3□□□□□ -1.88
UPF2Q9HAU5 AP003122.5-201ENST00000527668 3766 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC011460.1-201ENST00000636268 1834 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 RNU6-282P-201ENST00000365357 103 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 MRPL50P2-201ENST00000416821 482 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC007283.2-201ENST00000424739 197 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC019097.1-201ENST00000424783 735 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 RPL31P35-201ENST00000431058 377 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 RABEPKP1-201ENST00000440529 1026 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 TPT1P14-201ENST00000448018 505 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.29□□□□□ -1.88
UPF2Q9HAU5 RBM43P1-201ENST00000476891 1081 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC004924.1-201ENST00000480160 781 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC105914.1-201ENST00000511798 226 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC022483.1-201ENST00000514020 567 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 MTND4LP26-201ENST00000518144 282 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.29□□□□□ -1.88
UPF2Q9HAU5 SNRPGP16-201ENST00000533275 226 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 MIR4635-201ENST00000583759 79 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AP001429.1-201ENST00000602568 530 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AP001330.4-201ENST00000604350 154 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC009268.2-201ENST00000621925 457 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AL353748.2-201ENST00000622148 471 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC112204.3-201ENST00000623822 332 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AL157786.1-207ENST00000627771 695 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 OR5H6-203ENST00000642105 978 ntBASIC3.29□□□□□ -1.88
UPF2Q9HAU5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
UPF2Q9HAU5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UPF2Q9HAU5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.28□□□□□ -1.88
UPF2Q9HAU5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.28□□□□□ -1.88
UPF2Q9HAU5 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
UPF2Q9HAU5 SNORA38.1-201ENST00000364172 131 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 RNY4P16-201ENST00000364768 94 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 RNU1-100P-201ENST00000365255 165 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 SNORA70.4-201ENST00000365509 134 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 SNORA48.5-201ENST00000391143 135 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 RPL21P75-201ENST00000396599 483 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 RPL21P28-201ENST00000401418 483 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AL592114.1-201ENST00000403842 483 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AL591034.1-201ENST00000407447 340 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 FCF1P9-201ENST00000412546 282 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.28□□□□□ -1.88
UPF2Q9HAU5 YPEL5P1-201ENST00000419731 367 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC079780.1-201ENST00000428259 207 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms