Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC026470.2-201ENST00000561492 181 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 RPL23AP87-202ENST00000573039 466 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 MIR4512-201ENST00000583257 77 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AL160290.3-201ENST00000604869 165 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 MIR15A-201ENST00000607334 83 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AL021879.1-201ENST00000611756 288 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AL138721.1-201ENST00000616756 179 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AP005019.3-201ENST00000620418 560 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AC139713.2-214ENST00000642059 1811 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC107027.3-201ENST00000565095 3473 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-1155P-201ENST00000363554 107 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 Y_RNA.152-201ENST00000363578 100 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-371P-201ENST00000364283 108 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 Y_RNA.380-201ENST00000365663 111 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-713P-201ENST00000384761 107 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 MIR1250-201ENST00000408098 113 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 FAR2P2-201ENST00000413041 594 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 SYF2P2-201ENST00000417620 583 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 UBE2V1P4-201ENST00000425374 344 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 DNAJC19P7-201ENST00000428811 344 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC068287.1-201ENST00000430283 295 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 ARL5AP4-201ENST00000430731 512 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC016712.1-201ENST00000431088 378 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC011816.1-201ENST00000441346 546 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC133473.1-201ENST00000455173 299 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 PCMTD1P1-201ENST00000455560 355 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-953P-201ENST00000459154 107 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 RPL23AP2-201ENST00000471227 466 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 MTND3P25-201ENST00000509243 135 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 Y_RNA.680-201ENST00000516441 93 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 RN7SKP234-201ENST00000517173 224 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 IGLVIV-65-201ENST00000517313 360 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 RAB9BP1-201ENST00000519581 626 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC022616.4-201ENST00000522985 181 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC100770.1-201ENST00000532310 322 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 MIR5096-201ENST00000583713 70 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 SDR42E1P2-201ENST00000614861 481 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AC007546.2-201ENST00000623996 360 ntBASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SEC61A2Q9H9S3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-1249P-201ENST00000363237 111 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 Y_RNA.288-201ENST00000364854 92 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 RNA5SP22-201ENST00000365393 109 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 Y_RNA.461-201ENST00000384263 103 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-790P-201ENST00000384479 105 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-178P-201ENST00000384631 104 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 MIR141-201ENST00000384975 95 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 SNORA68.2-201ENST00000391263 128 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 RNU2-43P-201ENST00000410306 190 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-712P-201ENST00000410558 100 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 AC016397.1-201ENST00000412463 242 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 AL356968.1-201ENST00000416622 474 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 AL732292.1-201ENST00000426692 226 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 RPS27AP12-201ENST00000429552 465 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 EIF4A1P11-201ENST00000451239 222 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 OR2AQ1P-201ENST00000451972 200 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 CEACAMP4-201ENST00000457676 421 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 RPS23P3-201ENST00000470993 430 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 RPS27AP13-201ENST00000498403 237 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 PPBPP1-201ENST00000510807 373 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-408P-201ENST00000515910 100 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 AC022790.1-201ENST00000522872 204 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 AC090281.1-201ENST00000523019 276 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 HIGD1AP5-201ENST00000529959 259 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 AP000889.1-201ENST00000530968 660 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms