Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 GLUD1P4-201ENST00000590914 418 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC007619.2-201ENST00000605743 379 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC006133.1-201ENST00000617106 264 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AL603839.4-201ENST00000624658 1005 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC233263.6-201ENST00000631132 1963 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC091564.4-201ENST00000533934 2194 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 FTLP6-201ENST00000355274 422 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RNU6-288P-201ENST00000363690 104 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RNU6-512P-201ENST00000364438 103 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RNU6-198P-201ENST00000384258 104 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 SNORD116-2-201ENST00000384274 95 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RNU6-1035P-201ENST00000384477 107 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 SNORD116-6-201ENST00000384711 96 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 MIR490-201ENST00000384865 128 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RNU2-33P-201ENST00000410344 192 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 HMGN1P14-201ENST00000412459 517 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RPLP0P7-201ENST00000416050 667 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AC069157.1-201ENST00000421749 137 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AC006366.1-201ENST00000422002 759 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RPS29P12-201ENST00000460178 152 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AC133134.1-201ENST00000466800 359 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RPS20P22-201ENST00000473700 357 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AP002812.1-201ENST00000495378 474 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AIG1P1-201ENST00000503376 148 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RNU2-46P-201ENST00000517038 113 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RNA5SP290-201ENST00000517133 127 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RN7SKP258-201ENST00000517151 304 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 DUXAP2-201ENST00000519198 589 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AL049779.4-201ENST00000604500 156 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AC245389.1-201ENST00000605141 529 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AL138880.2-201ENST00000616214 239 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 AC110994.2-201ENST00000635481 492 ntBASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VIPAS39Q9H9C1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 GNG5P1-201ENST00000255500 204 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 RNU4-1-201ENST00000363925 141 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 RNU6-188P-201ENST00000364207 107 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 RNU6-140P-201ENST00000384566 108 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 MIR23B-201ENST00000384832 97 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 U3.19-201ENST00000390893 196 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 RNA5SP210-201ENST00000391034 120 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 RPS3AP3-201ENST00000411933 242 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC092047.1-201ENST00000424997 240 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 ISCA1P6-201ENST00000427740 390 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC112220.1-201ENST00000434628 355 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 PGBD4P3-201ENST00000440731 581 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 NEFMP1-201ENST00000443423 1006 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 MTND6P13-201ENST00000443510 523 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 MTND2P22-201ENST00000444325 1033 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 CECR9-201ENST00000453421 199 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AL160314.1-201ENST00000490836 438 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 RNU6-927P-201ENST00000516199 100 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 Y_RNA.672-201ENST00000516289 104 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 Y_RNA.695-201ENST00000516715 107 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AP006587.4-201ENST00000526053 529 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 HSPE1P20-201ENST00000538133 289 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AMZ2P1-203ENST00000565833 850 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 HMGB1P6-201ENST00000569046 646 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC137800.2-201ENST00000574375 120 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC138761.3-201ENST00000579993 334 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 MIR3158-1-201ENST00000583596 81 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC110760.3-201ENST00000598794 467 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC119751.7-201ENST00000600494 245 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 AC008739.3-201ENST00000603262 127 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 SEPT7P9-203ENST00000604116 343 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 NUTF2P8-201ENST00000604593 363 ntBASIC2.75□□□□□ -1.97
VIPAS39Q9H9C1 MTND4LP5-201ENST00000605152 292 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms