Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 USP9YP32-201ENST00000452432 430 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 RPL7P47-201ENST00000497299 556 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 EIF4EP3-201ENST00000498782 656 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 SCARNA13-201ENST00000516672 275 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AP003072.2-201ENST00000527756 676 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 MIR4742-201ENST00000581069 85 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 MIR3171-201ENST00000584270 74 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AC121334.2-201ENST00000605387 271 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AC040896.1-201ENST00000613819 479 ntBASIC3.61□□□□□ -1.83
EBF3Q9H4W6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EBF3Q9H4W6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AC006020.1-201ENST00000420179 1854 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 RNU6-97P-201ENST00000363387 104 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 U3.20-201ENST00000390909 217 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 RNU2-15P-201ENST00000410692 191 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 RN7SKP53-201ENST00000411337 315 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 MTND3P8-201ENST00000412909 339 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AL645937.1-202ENST00000421799 937 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 IFNA20P-201ENST00000436840 528 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 BRK1P2-201ENST00000442875 223 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 MTND4P17-201ENST00000470444 350 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AC021382.1-201ENST00000483523 359 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 RNU4-49P-201ENST00000516080 140 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 SCARNA24.1-201ENST00000516465 137 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 Y_RNA.691-201ENST00000516611 103 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 RNU6-1314P-201ENST00000517139 104 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 IGKV2-26-201ENST00000518305 343 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AP003497.1-201ENST00000528472 562 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AC087241.2-201ENST00000535801 324 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 ELOCP31-201ENST00000540463 467 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AL356432.3-201ENST00000568952 465 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 UBE2L4-201ENST00000587688 464 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AL354950.2-201ENST00000617939 290 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AL133216.2-202ENST00000634512 349 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 MIR4496-201ENST00000635896 61 ntBASIC3.6□□□□□ -1.83
EBF3Q9H4W6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EBF3Q9H4W6 AC009902.3-201ENST00000606235 2172 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.59□□□□□ -1.83
EBF3Q9H4W6 AC011460.1-201ENST00000636268 1834 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
EBF3Q9H4W6 NACAP2-201ENST00000318548 624 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 RNVU1-3-201ENST00000364313 161 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 RNY4P16-201ENST00000364768 94 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 RNU6-108P-201ENST00000365558 107 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 SNORA70E-201ENST00000384492 135 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 TXNP7-201ENST00000406296 293 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.59□□□□□ -1.83
EBF3Q9H4W6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.59□□□□□ -1.83
EBF3Q9H4W6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.59□□□□□ -1.83
EBF3Q9H4W6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.59□□□□□ -1.83
EBF3Q9H4W6 HMGB1P18-201ENST00000438801 619 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 AL138799.3-201ENST00000438968 350 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.59□□□□□ -1.83
EBF3Q9H4W6 AL353691.1-201ENST00000451332 387 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.59□□□□□ -1.83
EBF3Q9H4W6 ANP32BP2-201ENST00000454525 545 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 AC104308.1-201ENST00000454621 333 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 HMGN2P7-201ENST00000456186 273 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 SNORD19B-201ENST00000459623 84 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.59□□□□□ -1.83
EBF3Q9H4W6 HMGN2P26-201ENST00000463169 339 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 RPS29P2-201ENST00000479278 136 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 AC093663.1-201ENST00000497190 394 ntBASIC3.59□□□□□ -1.83
EBF3Q9H4W6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms