Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 MIR3941-201ENST00000582572 103 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 VN1R85P-201ENST00000601587 426 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AL020997.2-201ENST00000602607 184 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AL138889.2-201ENST00000603883 242 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC104695.3-201ENST00000604052 296 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC018462.2-201ENST00000605375 395 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC015967.1-201ENST00000619893 476 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC006971.1-201ENST00000407916 4486 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 NOL8P1-201ENST00000508336 3529 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 EOGT-210ENST00000615922 1931 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC007390.2-201ENST00000606229 3803 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 SPRR2C-201ENST00000290702 219 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 RNA5SP502-201ENST00000362694 119 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 RNU6-379P-201ENST00000363813 104 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 RNU6-701P-201ENST00000384059 107 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 MIR195-201ENST00000385194 87 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 RNU6-754P-201ENST00000391166 107 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 Y_RNA.645-201ENST00000391229 102 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AL445189.1-201ENST00000405722 338 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 RNU6-847P-201ENST00000411115 108 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 RPLP0P7-201ENST00000416050 667 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AP000873.1-201ENST00000463987 400 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 RPS27AP1-201ENST00000475545 471 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC108022.1-201ENST00000493466 478 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AP001086.1-201ENST00000494882 321 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 HMGB1P22-201ENST00000505315 124 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC107222.1-201ENST00000510899 637 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 SNORA14.1-201ENST00000516113 141 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 SCARNA16.2-201ENST00000516520 172 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 MIR2116-201ENST00000517221 80 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC009812.2-201ENST00000517657 457 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AL353748.2-201ENST00000622148 471 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 AC112484.5-201ENST00000624189 228 ntBASIC4.42□□□□□ -1.7
RNF38Q9H0F5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RNF38Q9H0F5 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC103710.2-202ENST00000641454 2853 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 Y_RNA.80-201ENST00000362996 102 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 RNU6-1284P-201ENST00000363701 100 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 RNU6-715P-201ENST00000365204 103 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 Y_RNA.485-201ENST00000384395 102 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 RNU6-393P-201ENST00000384475 107 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 RNU6-882P-201ENST00000391025 103 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 RPL23AP48-201ENST00000406913 488 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 RPL17P36-201ENST00000420302 549 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 HIGD1AP11-201ENST00000438361 280 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 snoU13.24-201ENST00000458998 104 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC008481.1-201ENST00000463278 396 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC087884.1-201ENST00000469738 328 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 RPL23AP2-201ENST00000471227 466 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC078918.1-201ENST00000498515 228 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC022493.2-201ENST00000506122 481 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 RNU6-1069P-201ENST00000516612 133 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC090281.1-201ENST00000523019 276 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC023442.1-201ENST00000531247 422 ntBASIC4.41□□□□□ -1.7
RNF38Q9H0F5 AC006064.5-201ENST00000541782 248 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms