Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.52□□□□□ -1.85
MEIS3Q99687 AL512310.1-201ENST00000548639 172 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AC125611.2-201ENST00000551907 647 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.52□□□□□ -1.85
MEIS3Q99687 HMGB3P26-201ENST00000560051 582 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.52□□□□□ -1.85
MEIS3Q99687 MIR5047-201ENST00000579212 100 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.52□□□□□ -1.85
MEIS3Q99687 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.52□□□□□ -1.85
MEIS3Q99687 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.52□□□□□ -1.85
MEIS3Q99687 AL137843.1-201ENST00000605078 385 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.52□□□□□ -1.85
MEIS3Q99687 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.52□□□□□ -1.85
MEIS3Q99687 AL355472.4-201ENST00000610233 626 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.52□□□□□ -1.85
MEIS3Q99687 AC126177.8-201ENST00000618339 1015 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AL356585.4-201ENST00000623078 1229 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AP006248.2-201ENST00000623309 592 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.52□□□□□ -1.85
MEIS3Q99687 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.52□□□□□ -1.85
MEIS3Q99687 AC100810.6-201ENST00000638068 285 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 Z73965.1-201ENST00000623412 2297 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.52□□□□□ -1.85
MEIS3Q99687 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MEIS3Q99687 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MEIS3Q99687 AC007529.1-201ENST00000418574 2178 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AL157700.1-201ENST00000561973 1432 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MEIS3Q99687 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MEIS3Q99687 RNU1-112P-201ENST00000364401 164 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 SNORD81.2-201ENST00000365153 76 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 RNU1-39P-201ENST00000383897 165 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 SNORA20.2-201ENST00000383922 131 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 RNU6-1158P-201ENST00000391167 107 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 AC007390.1-201ENST00000415722 356 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 MTATP6P18-201ENST00000417994 673 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 RPS15AP12-201ENST00000419498 388 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 RPL30P3-201ENST00000424262 333 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.51□□□□□ -1.85
MEIS3Q99687 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.51□□□□□ -1.85
MEIS3Q99687 RPL36AP51-201ENST00000487216 318 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 AC096576.1-201ENST00000489014 359 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.51□□□□□ -1.85
MEIS3Q99687 AC022616.3-201ENST00000523940 148 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MEIS3Q99687 ZNF705CP-201ENST00000530515 889 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 OR5B19P-201ENST00000531766 928 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.51□□□□□ -1.85
MEIS3Q99687 AC024224.1-201ENST00000538284 609 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.51□□□□□ -1.85
MEIS3Q99687 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.51□□□□□ -1.85
MEIS3Q99687 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.51□□□□□ -1.85
MEIS3Q99687 AC005034.5-201ENST00000604219 466 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 AC006504.8-201ENST00000621046 635 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 AC024940.5-201ENST00000622889 474 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.51□□□□□ -1.85
MEIS3Q99687 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.51□□□□□ -1.85
MEIS3Q99687 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MEIS3Q99687 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MEIS3Q99687 AL021368.2-201ENST00000606125 5352 ntBASIC3.51□□□□□ -1.85
MEIS3Q99687 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MEIS3Q99687 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.5□□□□□ -1.85
MEIS3Q99687 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.5□□□□□ -1.85
MEIS3Q99687 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MEIS3Q99687 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
MEIS3Q99687 RPL9P7-201ENST00000330965 580 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 RNU6-169P-201ENST00000365336 107 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 MIR1-2-201ENST00000384961 85 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 RNU6-332P-201ENST00000391193 108 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 AL356432.1-201ENST00000405809 419 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.5□□□□□ -1.85
MEIS3Q99687 MTCO3P12-201ENST00000416718 547 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 AL353777.1-201ENST00000425552 326 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 AC091390.3-201ENST00000426478 338 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 AC006548.1-201ENST00000427470 102 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 OR51AB1P-201ENST00000429046 620 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.5□□□□□ -1.85
MEIS3Q99687 RPS20P5-201ENST00000434808 360 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 HSPE1P28-201ENST00000443139 211 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 SNRPGP6-201ENST00000451124 220 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 AC104073.1-201ENST00000451988 151 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.5□□□□□ -1.85
MEIS3Q99687 RPS20P24-201ENST00000457473 361 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 AC233702.1-201ENST00000482905 502 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MEIS3Q99687 RNU6-201P-201ENST00000517100 61 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.5□□□□□ -1.85
MEIS3Q99687 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.5□□□□□ -1.85
MEIS3Q99687 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.5□□□□□ -1.85
MEIS3Q99687 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.5□□□□□ -1.85
MEIS3Q99687 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.5□□□□□ -1.85
MEIS3Q99687 AP003034.1-201ENST00000534621 422 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MEIS3Q99687 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.5□□□□□ -1.85
MEIS3Q99687 LSM6P2-201ENST00000552208 177 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.5□□□□□ -1.85
MEIS3Q99687 AC055876.1-202ENST00000567053 138 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 NRBF2P5-201ENST00000603087 788 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 AC010680.3-201ENST00000604215 520 ntBASIC3.5□□□□□ -1.85
MEIS3Q99687 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms