Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.542-201ENST00000384641 111 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 PPP1R11P2-201ENST00000423543 382 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 HIGD1AP2-201ENST00000446367 280 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 IGHV5-78-201ENST00000450948 295 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 AC097484.1-201ENST00000471148 389 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 RPL23AP40-201ENST00000487630 390 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 TRBV5-2-201ENST00000489095 273 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 RNU6-589P-201ENST00000516485 107 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 AC055872.1-201ENST00000570978 278 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 MIR4444-1-201ENST00000581696 74 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 MIR4444-2-201ENST00000584390 74 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 AC009314.1-201ENST00000603871 304 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 RN7SKP224-201ENST00000364140 325 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.369-201ENST00000365568 117 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 RNU6-1144P-201ENST00000384247 104 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 RNU6-21P-201ENST00000384710 107 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 HMGN2P27-201ENST00000427352 270 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 AC138761.5-201ENST00000433967 325 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 AC112498.1-201ENST00000444401 332 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 EEF1B2P7-201ENST00000451177 676 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 ACA64.4-201ENST00000459070 127 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 U8.21-201ENST00000459536 136 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 RPS27AP13-201ENST00000498403 237 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 HMGN1P11-201ENST00000508668 303 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 SNORA31.3-201ENST00000516029 96 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 RNU6-612P-201ENST00000516909 102 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 AC008749.1-201ENST00000597650 306 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 AC011944.2-201ENST00000624440 683 ntBASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP3BQ96NU0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CNTNAP3BQ96NU0 AC139769.1-204ENST00000472297 1931 ntBASIC5.09□□□□□ -1.6
CNTNAP3BQ96NU0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CNTNAP3BQ96NU0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CNTNAP3BQ96NU0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CNTNAP3BQ96NU0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 SNORA73.1-201ENST00000363107 205 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 RNU6-288P-201ENST00000363690 104 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 RNA5SP28-201ENST00000363841 119 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 RPL21P67-201ENST00000402896 478 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 RNU2-2P-201ENST00000410396 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 GSTM5P1-201ENST00000434751 660 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 AC099670.2-201ENST00000435130 321 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 RPL23AP58-201ENST00000440453 469 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 GEMIN8P3-201ENST00000445417 720 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 AC073901.1-201ENST00000462471 408 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 AC140172.1-201ENST00000502928 141 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 TOMM22P4-201ENST00000511318 336 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 RAC1P5-201ENST00000512182 576 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 RNU7-175P-201ENST00000515915 61 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 RNU7-110P-201ENST00000516891 62 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 SCARNA16.4-201ENST00000516956 187 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 DEFB131C-201ENST00000528817 165 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 MIR3158-1-201ENST00000583596 81 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 RNU2-4P-201ENST00000606190 192 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 U2.15-201ENST00000611544 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 U2.16-201ENST00000613119 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 U2.12-201ENST00000613778 191 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms