Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 AC034102.8-201ENST00000615146 484 ntBASIC2.9□□□□□ -1.95
CCDC43Q96MW1 AP002782.1-201ENST00000623107 614 ntBASIC2.9□□□□□ -1.95
CCDC43Q96MW1 U2.21-201ENST00000637295 81 ntBASIC2.9□□□□□ -1.95
CCDC43Q96MW1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CCDC43Q96MW1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
CCDC43Q96MW1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC43Q96MW1 RN7SKP226-201ENST00000364912 300 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC43Q96MW1 RNU1-73P-201ENST00000383971 164 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 RNU6-1200P-201ENST00000384162 107 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 RSL24D1P4-201ENST00000400938 484 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC43Q96MW1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC43Q96MW1 AC013410.2-201ENST00000422627 201 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC43Q96MW1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC43Q96MW1 GPM6BP2-201ENST00000432046 144 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 GPM6BP1-201ENST00000446387 144 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC43Q96MW1 OR6C5P-201ENST00000452388 923 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC43Q96MW1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC43Q96MW1 RPF2P2-201ENST00000504693 896 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 AC098591.2-201ENST00000510152 315 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC43Q96MW1 AL356575.1-201ENST00000603008 283 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 AC140725.3-201ENST00000616193 880 ntBASIC2.89□□□□□ -1.95
CCDC43Q96MW1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC43Q96MW1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
CCDC43Q96MW1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC43Q96MW1 UBE2L2-201ENST00000254302 429 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 RNU5A-8P-201ENST00000364102 114 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 SNORA25.6-201ENST00000364121 118 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 Y_RNA.302-201ENST00000364997 102 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 RNU6-253P-201ENST00000384730 105 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.88□□□□□ -1.95
CCDC43Q96MW1 RNU2-68P-201ENST00000410878 191 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 NDUFS5P4-201ENST00000412983 318 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 USP9YP20-201ENST00000419224 558 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC43Q96MW1 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AC011816.1-201ENST00000441346 546 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC43Q96MW1 RPL23AP41-201ENST00000484754 458 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AC020699.1-201ENST00000505161 445 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AC034244.1-201ENST00000507687 207 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 RNA5SP282-201ENST00000516355 108 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 MTATP6P15-201ENST00000527233 835 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC43Q96MW1 MIR4307-201ENST00000582802 84 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC43Q96MW1 RPL12P50-201ENST00000603116 116 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AC026790.2-201ENST00000606282 430 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AC024933.1-201ENST00000608472 348 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 OR10AB1P-201ENST00000609613 938 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AC021755.4-201ENST00000616620 456 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 MIR6852-201ENST00000621699 66 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC43Q96MW1 ELF2P3-201ENST00000445099 1506 ntBASIC2.88□□□□□ -1.95
CCDC43Q96MW1 AC010889.1-201ENST00000566193 2666 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AC110491.1-201ENST00000562191 2010 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AC108938.1-201ENST00000451204 136 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AC108059.3-201ENST00000456388 214 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 RPL37P6-201ENST00000460682 294 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 MTND2P32-201ENST00000521584 1038 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 NACAP3-201ENST00000552100 481 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 MIR4999-201ENST00000585029 91 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AC107214.2-201ENST00000608204 634 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AC090970.3-201ENST00000612566 866 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AC079416.3-201ENST00000624479 549 ntBASIC2.87□□□□□ -1.95
CCDC43Q96MW1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC43Q96MW1 SNORD113-6-201ENST00000363345 75 ntBASIC2.86□□□□□ -1.95
CCDC43Q96MW1 RNU6-1284P-201ENST00000363701 100 ntBASIC2.86□□□□□ -1.95
CCDC43Q96MW1 RNU1-100P-201ENST00000365255 165 ntBASIC2.86□□□□□ -1.95
CCDC43Q96MW1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CCDC43Q96MW1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CCDC43Q96MW1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC43Q96MW1 UBE2V1P2-201ENST00000397758 440 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms