Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC130324.3-201ENST00000614165 542 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AL121772.2-201ENST00000614331 297 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC068831.7-201ENST00000616954 363 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 U6.42-201ENST00000618440 107 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 ZNF285B-201ENST00000561698 1767 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 CASC19-280ENST00000642102 1351 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC004972.1-201ENST00000623934 2209 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-1287P-201ENST00000362914 107 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-288P-201ENST00000363690 104 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-190P-201ENST00000384154 102 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-14P-201ENST00000384630 106 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-1060P-201ENST00000384664 107 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 UBE2V1P2-201ENST00000397758 440 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 FGF7P8-201ENST00000402994 292 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AL513331.1-201ENST00000411908 397 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 HMGB1P27-201ENST00000431429 603 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 MTCO3P18-201ENST00000440206 761 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 CALM1P1-201ENST00000442082 433 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AL118520.1-201ENST00000450770 291 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 SNORD105B-201ENST00000458770 79 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 RBBP4P6-201ENST00000508098 202 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AC023632.4-201ENST00000517783 191 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AP005435.4-201ENST00000529514 284 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 MIR4703-201ENST00000577728 79 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AC060780.3-201ENST00000589464 80 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AC002545.1-201ENST00000592511 181 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AC010338.1-201ENST00000621823 717 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 RIOK3P1-201ENST00000418778 1528 ntBASIC4□□□□□ -1.77
CDK5RAP3Q96JB5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-552P-201ENST00000362869 119 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 Y_RNA.303-201ENST00000364998 94 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-903P-201ENST00000391270 109 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AL136116.1-201ENST00000403591 381 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RNU2-29P-201ENST00000410423 189 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-387P-201ENST00000411331 105 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RN7SKP53-201ENST00000411337 315 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RPL27AP8-201ENST00000424277 446 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 MTND4P25-201ENST00000441039 533 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RNA5SP310-201ENST00000459084 116 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RPL31P60-201ENST00000478450 367 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 EIF4EP3-201ENST00000498782 656 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 Y_RNA.689-201ENST00000516589 107 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-677P-201ENST00000516914 101 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-1231P-201ENST00000517185 103 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 SUB1P1-201ENST00000524415 382 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 RANP3-201ENST00000530970 276 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 MIR4474-201ENST00000579189 78 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AP001486.3-201ENST00000615334 372 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AC002076.2-201ENST00000617362 122 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 uc_338.11-201ENST00000619132 160 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 U4.6-201ENST00000621618 127 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 AC009033.1-201ENST00000624279 431 ntBASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CDK5RAP3Q96JB5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 ASNSP3-201ENST00000451989 1306 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms