Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU6-281P-201ENST00000384212 103 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 MIR105-1-201ENST00000385222 81 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 RNU11-201ENST00000387069 134 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 RNU6-578P-201ENST00000390980 103 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 AL627311.1-201ENST00000431514 115 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.73□□□□□ -1.49
LRCH3Q96II8 CYCSP32-201ENST00000440548 321 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 MTATP6P7-201ENST00000453315 681 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.73□□□□□ -1.49
LRCH3Q96II8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.73□□□□□ -1.49
LRCH3Q96II8 AF186996.7-201ENST00000492781 209 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 SCARNA13-201ENST00000516672 275 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.73□□□□□ -1.49
LRCH3Q96II8 AC023043.3-201ENST00000593113 385 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 AL360012.1-201ENST00000602813 131 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRCH3Q96II8 AL353796.1-201ENST00000561542 3241 ntBASIC5.73□□□□□ -1.49
LRCH3Q96II8 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LRCH3Q96II8 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRCH3Q96II8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 RNU6-263P-201ENST00000363811 107 ntBASIC5.72□□□□□ -1.49
LRCH3Q96II8 RNU6-1145P-201ENST00000384246 107 ntBASIC5.72□□□□□ -1.49
LRCH3Q96II8 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 RNU6-460P-201ENST00000391158 108 ntBASIC5.72□□□□□ -1.49
LRCH3Q96II8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.72□□□□□ -1.49
LRCH3Q96II8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 RNA5SP464-201ENST00000516251 108 ntBASIC5.72□□□□□ -1.49
LRCH3Q96II8 Y_RNA.712-201ENST00000517011 92 ntBASIC5.72□□□□□ -1.49
LRCH3Q96II8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 AC090877.1-201ENST00000561418 344 ntBASIC5.72□□□□□ -1.49
LRCH3Q96II8 AC007224.1-201ENST00000564410 144 ntBASIC5.72□□□□□ -1.49
LRCH3Q96II8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 AC092628.2-201ENST00000622492 339 ntBASIC5.72□□□□□ -1.49
LRCH3Q96II8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 AC099654.2-201ENST00000433031 1980 ntBASIC5.72□□□□□ -1.49
LRCH3Q96II8 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 AC140479.2-201ENST00000421567 3130 ntBASIC5.72□□□□□ -1.49
LRCH3Q96II8 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRCH3Q96II8 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.72□□□□□ -1.49
LRCH3Q96II8 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
LRCH3Q96II8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
LRCH3Q96II8 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LRCH3Q96II8 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRCH3Q96II8 AC020656.2-201ENST00000613291 5309 ntBASIC5.71□□□□□ -1.5
LRCH3Q96II8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.71□□□□□ -1.5
LRCH3Q96II8 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
LRCH3Q96II8 RNU6-541P-201ENST00000384709 110 ntBASIC5.71□□□□□ -1.5
LRCH3Q96II8 AL035079.1-201ENST00000405210 287 ntBASIC5.71□□□□□ -1.5
LRCH3Q96II8 RPL34P20-201ENST00000442771 351 ntBASIC5.71□□□□□ -1.5
LRCH3Q96II8 RPL12P39-201ENST00000455456 496 ntBASIC5.71□□□□□ -1.5
LRCH3Q96II8 AC091167.1-201ENST00000492017 396 ntBASIC5.71□□□□□ -1.5
LRCH3Q96II8 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.71□□□□□ -1.5
LRCH3Q96II8 AC010265.1-201ENST00000513509 211 ntBASIC5.71□□□□□ -1.5
LRCH3Q96II8 UBL5P4-201ENST00000562584 236 ntBASIC5.71□□□□□ -1.5
LRCH3Q96II8 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.71□□□□□ -1.5
LRCH3Q96II8 MIR4744-201ENST00000581563 82 ntBASIC5.71□□□□□ -1.5
LRCH3Q96II8 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRCH3Q96II8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.71□□□□□ -1.5
LRCH3Q96II8 U4.7-201ENST00000638126 106 ntBASIC5.71□□□□□ -1.5
LRCH3Q96II8 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
LRCH3Q96II8 MFSD8-239ENST00000641590 2479 ntBASIC5.71□□□□□ -1.5
LRCH3Q96II8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRCH3Q96II8 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRCH3Q96II8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.71□□□□□ -1.5
LRCH3Q96II8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
LRCH3Q96II8 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
LRCH3Q96II8 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.71□□□□□ -1.5
LRCH3Q96II8 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRCH3Q96II8 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRCH3Q96II8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRCH3Q96II8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRCH3Q96II8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRCH3Q96II8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.7□□□□□ -1.5
LRCH3Q96II8 RNU6-1167P-201ENST00000363227 94 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 RNA5SP387-201ENST00000364226 106 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 RNA5SP428-201ENST00000365129 132 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 RNU6-1286P-201ENST00000383871 107 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 SNORA36C-201ENST00000384289 132 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRCH3Q96II8 HLFP1-201ENST00000402375 499 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 RAB9AP3-201ENST00000412737 573 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 DDX39BP1-205ENST00000422507 192 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms