Protein–RNA interactions for Protein: Q969Q1

TRIM63, E3 ubiquitin-protein ligase TRIM63, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM63Q969Q1 MIR412-201ENST00000362142 91 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 Y_RNA.3-201ENST00000362331 103 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 RNA5SP383-201ENST00000362934 120 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 RNA5SP399-201ENST00000364003 117 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AL022722.2-201ENST00000402519 180 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 RNU6-1328P-201ENST00000410938 106 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 ATG3P1-201ENST00000419507 911 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 C8orf59P1-201ENST00000429930 303 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 RPL23AP22-201ENST00000437556 453 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 RPL23AP20-201ENST00000447965 421 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC027673.1-201ENST00000456245 405 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC010326.1-201ENST00000462726 602 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 GMFBP1-201ENST00000467831 427 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 RN7SL177P-201ENST00000476596 299 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AL132838.2-201ENST00000492041 314 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC008716.1-201ENST00000511084 513 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC105417.1-201ENST00000514691 285 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 RNU6-1178P-201ENST00000516674 107 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 RNU6-56P-201ENST00000516986 93 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC087369.1-201ENST00000520775 996 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC092325.1-201ENST00000566449 554 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 MIR4506-201ENST00000584693 77 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 RPL12P25-202ENST00000598100 674 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AL391813.1-201ENST00000603098 260 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AL161729.3-201ENST00000603533 673 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC012507.3-201ENST00000603556 477 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AL137849.1-201ENST00000604767 169 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AP001330.5-201ENST00000607176 411 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AL136295.6-201ENST00000610486 658 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 Mico1.1-201ENST00000611698 204 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AL354950.2-201ENST00000617939 290 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC010338.1-201ENST00000621823 717 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AL359880.1-201ENST00000621879 266 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 AC073073.2-201ENST00000609827 2578 ntBASIC3.32□□□□□ -1.88
TRIM63Q969Q1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 RNU6-1303P-201ENST00000364841 107 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 RNU6-996P-201ENST00000365438 107 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 RNU6-1127P-201ENST00000384580 107 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 MIR10A-201ENST00000385043 110 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 MIR105-2-201ENST00000385083 81 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AL136116.1-201ENST00000403591 381 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 RNU2-3P-201ENST00000410144 191 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 RNU4-46P-201ENST00000410818 138 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 NDUFB4P5-201ENST00000415445 361 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AC096649.2-201ENST00000416186 393 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AL353621.1-201ENST00000418219 243 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AC068533.1-201ENST00000418542 415 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AL356387.2-201ENST00000422272 243 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AC009969.1-201ENST00000438726 172 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AC008958.1-201ENST00000511047 682 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 SNORA40.12-201ENST00000516329 111 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 RNU6-720P-201ENST00000516363 108 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AP001893.2-201ENST00000526949 202 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AC104383.1-201ENST00000530297 370 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 OR7E18P-201ENST00000592589 702 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 KLKP1-201ENST00000595979 403 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AC011890.2-201ENST00000613393 294 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 AC099654.12-201ENST00000639868 649 ntBASIC3.31□□□□□ -1.88
TRIM63Q969Q1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM63Q969Q1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
TRIM63Q969Q1 ZNF519P1-201ENST00000449011 1626 ntBASIC3.3□□□□□ -1.88
TRIM63Q969Q1 Z83843.1-201ENST00000604070 3685 ntBASIC3.3□□□□□ -1.88
TRIM63Q969Q1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRIM63Q969Q1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM63Q969Q1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM63Q969Q1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM63Q969Q1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TRIM63Q969Q1 RNU1-100P-201ENST00000365255 165 ntBASIC3.3□□□□□ -1.88
TRIM63Q969Q1 AP002088.1-201ENST00000382740 395 ntBASIC3.3□□□□□ -1.88
TRIM63Q969Q1 RNU6-45P-201ENST00000384471 107 ntBASIC3.3□□□□□ -1.88
TRIM63Q969Q1 CIR1P3-201ENST00000405137 479 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms