Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01006Q8NI28 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01006Q8NI28 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
LINC01006Q8NI28 AC090740.1-201ENST00000623193 2262 ntBASIC2.35□□□□□ -2.03
LINC01006Q8NI28 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01006Q8NI28 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
LINC01006Q8NI28 MTND4P5-201ENST00000435821 1374 ntBASIC2.35□□□□□ -2.03
LINC01006Q8NI28 AC005832.2-201ENST00000538921 1430 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AF117829.1-206ENST00000621883 3802 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 OR4G2P-202ENST00000641004 1759 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RNU5A-1-201ENST00000362698 116 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RNU6-301P-201ENST00000384277 107 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RNU6-192P-201ENST00000391253 100 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RNU2-8P-201ENST00000410727 190 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AF274854.1-201ENST00000413236 615 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC007390.1-201ENST00000415722 356 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RPS15AP6-201ENST00000420703 385 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AL645937.1-202ENST00000421799 937 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RPL27AP8-201ENST00000424277 446 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC008850.1-201ENST00000427546 362 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC133104.1-201ENST00000429100 218 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 HMGN1P18-201ENST00000457642 277 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 MTCO2P29-201ENST00000465212 189 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AL049714.1-201ENST00000466686 347 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RN7SL429P-201ENST00000479090 223 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RN7SL489P-201ENST00000486185 223 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RN7SL327P-201ENST00000488659 223 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RPL9P6-201ENST00000492764 598 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 KCTD9P5-201ENST00000504141 1170 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC108078.1-201ENST00000508073 725 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 HIGD1AP13-201ENST00000509878 289 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RNU6-390P-201ENST00000516259 103 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 SNORA70.16-201ENST00000516390 95 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 FAM60DP-201ENST00000524174 632 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 MIR5047-201ENST00000579212 100 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 DPPA3P3-201ENST00000603842 430 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 RN7SL853P-201ENST00000617250 223 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 XIST_intron.1-201ENST00000619444 68 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
LINC01006Q8NI28 U6.98-201ENST00000637157 84 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 AC099654.12-201ENST00000639868 649 ntBASIC2.34□□□□□ -2.03
LINC01006Q8NI28 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.34□□□□□ -2.04
LINC01006Q8NI28 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.34□□□□□ -2.04
LINC01006Q8NI28 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
LINC01006Q8NI28 CR848007.1-201ENST00000442354 1699 ntBASIC2.34□□□□□ -2.04
LINC01006Q8NI28 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
LINC01006Q8NI28 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC091152.2-201ENST00000591628 2569 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC073325.2-201ENST00000339545 159 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 DEFB108F-201ENST00000344638 222 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 Y_RNA.22-201ENST00000362492 102 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RNU6-223P-201ENST00000362830 107 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RNU6-181P-201ENST00000363225 107 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 SNORD56.2-201ENST00000363242 71 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RNU6-188P-201ENST00000364207 107 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 U3.11-201ENST00000364476 212 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 Y_RNA.296-201ENST00000364930 108 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 TXNP7-201ENST00000406296 293 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 Y_RNA.599-201ENST00000410489 109 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RNU2-62P-201ENST00000410868 191 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 Y_RNA.619-201ENST00000410951 90 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RNA5SP184-201ENST00000411071 108 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 PIGFP2-201ENST00000421400 651 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RPL31P12-201ENST00000422587 358 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 UBE2D3P2-201ENST00000424409 445 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms