Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC119618.1-201ENST00000434191 222 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 SNRPEP9-201ENST00000436794 238 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 RPS12P2-201ENST00000439728 269 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 CYCSP32-201ENST00000440548 321 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 USP9YP15-201ENST00000442391 422 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 NEFMP1-201ENST00000443423 1006 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC009961.3-201ENST00000449832 765 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 RPL27AP5-201ENST00000469428 449 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC007224.1-201ENST00000564410 144 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC110760.3-201ENST00000598794 467 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC004805.2-201ENST00000605382 482 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC108479.2-201ENST00000617314 601 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC068831.8-201ENST00000620171 435 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 MIR6758-201ENST00000620653 63 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 FRG1KP-201ENST00000623592 341 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 MTND5P29-201ENST00000458676 1807 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AL359693.1-201ENST00000614959 2407 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 RNA5SP124-201ENST00000362739 110 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 U8.3-201ENST00000363321 132 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 SNORD56.5-201ENST00000364281 72 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 RNU1-109P-201ENST00000383960 147 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 SNORA40.3-201ENST00000390964 122 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 SNORA11B-201ENST00000408175 129 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 RPS29P4-201ENST00000414733 161 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AC104651.1-201ENST00000427559 735 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AC093106.2-201ENST00000428212 385 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 C4BPAP2-201ENST00000428434 478 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 HMGB1P27-201ENST00000431429 603 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 ARPC3P1-201ENST00000437218 533 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 CECR9-201ENST00000453421 199 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 SNORD42A-201ENST00000459584 64 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AC126182.1-201ENST00000478134 357 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 NDUFB4P2-201ENST00000509515 391 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 Y_RNA.688-201ENST00000516565 95 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 OR2AS2P-201ENST00000606902 342 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AC107294.1-201ENST00000609524 467 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AL589994.2-201ENST00000621124 579 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AC002064.3-201ENST00000623448 346 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AC110079.1-202ENST00000635213 138 ntBASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC197Q8NCU1 AC096644.4-201ENST00000563417 2912 ntBASIC2.65□□□□□ -1.98
CCDC197Q8NCU1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.98
CCDC197Q8NCU1 AC099654.7-201ENST00000635788 2127 ntBASIC2.65□□□□□ -1.98
CCDC197Q8NCU1 SNORD56.2-201ENST00000363242 71 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 RNU6-960P-201ENST00000364056 120 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 RNA5SP139-201ENST00000364340 117 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 RNU6-512P-201ENST00000364438 103 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 RNU6-297P-201ENST00000384636 107 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 RNU6-248P-201ENST00000410720 107 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 RAB9AP3-201ENST00000412737 573 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 AC137499.1-201ENST00000427602 88 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 AC009961.2-201ENST00000435771 251 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 PRDX3P3-201ENST00000447765 522 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 RAB9AP1-201ENST00000449393 573 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 CACYBPP2-201ENST00000453625 678 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 AL033528.1-201ENST00000453780 140 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 MTND4LP3-201ENST00000468320 276 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 SEM1P1-201ENST00000506694 209 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 AC117522.3-201ENST00000507974 584 ntBASIC2.65□□□□□ -1.99
CCDC197Q8NCU1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms