Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC108860.1-201ENST00000484521 383 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC079382.1-201ENST00000493346 557 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC110794.1-201ENST00000505816 425 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC004062.1-201ENST00000509926 645 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 RNU7-51P-201ENST00000516560 62 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC026333.2-201ENST00000542164 106 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 OR4H12P-201ENST00000556269 907 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 MIR5004-201ENST00000579078 107 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AF038458.1-201ENST00000588406 262 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AL162713.1-201ENST00000604480 262 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AP001330.5-201ENST00000607176 411 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS52Q8N1B4 DEFB108F-201ENST00000344638 222 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 RNU6-50P-201ENST00000362356 103 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 RNU6-1120P-201ENST00000362988 108 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 SNORA48.8-201ENST00000391324 134 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AL357075.1-201ENST00000404107 726 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 TXNP7-201ENST00000406296 293 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AL353193.1-201ENST00000421444 268 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 RPL23AP30-201ENST00000432419 501 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AL357552.1-201ENST00000445254 415 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 RPL23AP20-201ENST00000447965 421 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS52Q8N1B4 SSXP4-201ENST00000451349 245 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 RPL23AP31-201ENST00000456160 467 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AC022364.2-201ENST00000457963 554 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 HSPE1P6-201ENST00000479457 291 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS52Q8N1B4 SNORD27.1-201ENST00000516319 72 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS52Q8N1B4 MED28P6-201ENST00000558776 231 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 HMGB1P33-201ENST00000563485 527 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AC098848.2-201ENST00000588023 330 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AC067852.3-201ENST00000589177 561 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS52Q8N1B4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
VPS52Q8N1B4 AL137003.2-201ENST00000606924 2538 ntBASIC3.61□□□□□ -1.83
VPS52Q8N1B4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 RNA5SP197-201ENST00000363357 119 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 RNU6-960P-201ENST00000364056 120 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 UBA52P6-201ENST00000399822 382 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AL353678.1-201ENST00000422735 741 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 RPS20P5-201ENST00000434808 360 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 HMGB3P12-201ENST00000438745 556 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 RPS15AP9-201ENST00000439856 381 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 Z99127.3-201ENST00000448158 395 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 RN7SL442P-201ENST00000473804 320 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 APOOP4-201ENST00000513530 597 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 SNORA31.8-201ENST00000516327 108 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 Y_RNA.693-201ENST00000516641 110 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 RNU6-1092P-201ENST00000516955 87 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AL512310.1-201ENST00000548639 172 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC093012.1-202ENST00000549403 582 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 RPS3AP4-201ENST00000555161 764 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC025449.1-201ENST00000603896 529 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AL162274.2-201ENST00000614406 332 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 SDR42E1P2-201ENST00000614861 481 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC110801.1-201ENST00000623590 212 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 FRG1KP-201ENST00000623592 341 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS52Q8N1B4 ELF2P3-201ENST00000445099 1506 ntBASIC3.6□□□□□ -1.83
VPS52Q8N1B4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 RNU1-75P-201ENST00000347264 129 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms