Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 TRBV1-201ENST00000476502 284 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AP001804.3-201ENST00000525146 880 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AC009643.1-201ENST00000532030 391 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 OR11H5P-201ENST00000554039 926 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AC090877.1-201ENST00000561418 344 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 ARF4P1-201ENST00000605447 541 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AC009570.1-201ENST00000609599 745 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 MIR6868-201ENST00000611215 58 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AL133216.2-202ENST00000634512 349 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 HSPA8P4-201ENST00000511877 1920 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-82P-201ENST00000363970 107 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 RNA5SP399-201ENST00000364003 117 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 Y_RNA.414-201ENST00000384011 101 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 SNORD70.1-201ENST00000391007 85 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 USP9YP20-201ENST00000419224 558 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 TXNP1-201ENST00000441872 371 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-927P-201ENST00000516199 100 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-277P-201ENST00000516272 106 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AP003730.1-201ENST00000524605 285 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 CYCSP29-201ENST00000533731 318 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AP000763.2-201ENST00000540641 163 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 Z82243.1-201ENST00000609432 473 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AL445567.2-201ENST00000618935 498 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 MIR1302-1-201ENST00000637932 143 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AC002546.1-201ENST00000588041 2504 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 AC121333.1-201ENST00000567488 2709 ntBASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
PTCHD4Q6ZW05 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 Y_RNA.58-201ENST00000362807 102 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-1252P-201ENST00000363054 104 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 Y_RNA.154-201ENST00000363624 102 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 RNU1-32P-201ENST00000363937 159 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 RNY3P1-201ENST00000365085 102 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-715P-201ENST00000365204 103 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 RNY3-201ENST00000365484 102 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 Y_RNA.490-201ENST00000384413 102 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 RNA5SP219-201ENST00000390940 113 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 SNORA16.2-201ENST00000390991 127 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 BX682237.1-201ENST00000415016 335 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 AL160275.3-201ENST00000423876 471 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 TBCAP1-201ENST00000436520 327 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 RN7SL860P-201ENST00000473738 223 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-189P-201ENST00000516120 101 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 RN7SKP209-201ENST00000516888 304 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 RANP9-201ENST00000519957 271 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms