Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 HSPD1P15-201ENST00000505573 1122 ntBASIC3.18□□□□□ -1.9
PACS1Q6VY07 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PACS1Q6VY07 RNU6-445P-201ENST00000516949 107 ntBASIC3.18□□□□□ -1.9
PACS1Q6VY07 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.18□□□□□ -1.9
PACS1Q6VY07 ERHP1-201ENST00000523006 310 ntBASIC3.18□□□□□ -1.9
PACS1Q6VY07 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.18□□□□□ -1.9
PACS1Q6VY07 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.18□□□□□ -1.9
PACS1Q6VY07 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.18□□□□□ -1.9
PACS1Q6VY07 AC087883.1-201ENST00000551882 391 ntBASIC3.18□□□□□ -1.9
PACS1Q6VY07 MED28P6-201ENST00000558776 231 ntBASIC3.18□□□□□ -1.9
PACS1Q6VY07 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.18□□□□□ -1.9
PACS1Q6VY07 AC005951.2-201ENST00000576282 495 ntBASIC3.18□□□□□ -1.9
PACS1Q6VY07 AF038458.1-201ENST00000588406 262 ntBASIC3.18□□□□□ -1.9
PACS1Q6VY07 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PACS1Q6VY07 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.18□□□□□ -1.9
PACS1Q6VY07 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.18□□□□□ -1.9
PACS1Q6VY07 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PACS1Q6VY07 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PACS1Q6VY07 SNORD56.5-201ENST00000364281 72 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PACS1Q6VY07 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC110754.1-201ENST00000399740 601 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 MIR1289-1-201ENST00000408836 144 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 RN7SKP220-201ENST00000410611 288 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 RNU4-47P-201ENST00000410876 114 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 MTND1P4-201ENST00000435196 415 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 Z96811.1-201ENST00000445880 108 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 Z75741.1-201ENST00000446793 314 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC016696.1-201ENST00000446949 318 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 AL136380.1-201ENST00000447970 162 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 PRSS3P4-201ENST00000453323 162 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC010631.1-201ENST00000474150 156 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC109925.1-201ENST00000478069 331 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 RPL32P34-201ENST00000486380 400 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PACS1Q6VY07 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 FAM60DP-201ENST00000524174 632 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC055876.1-202ENST00000567053 138 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 AC025165.5-201ENST00000602802 578 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 AF250324.2-201ENST00000608299 610 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PACS1Q6VY07 AL158209.2-201ENST00000619266 216 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 OR5H6-203ENST00000642105 978 ntBASIC3.17□□□□□ -1.9
PACS1Q6VY07 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PACS1Q6VY07 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PACS1Q6VY07 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PACS1Q6VY07 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PACS1Q6VY07 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PACS1Q6VY07 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PACS1Q6VY07 RNU6-223P-201ENST00000362830 107 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 SNORD56.2-201ENST00000363242 71 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 RNU6-799P-201ENST00000363567 107 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 RNU6-517P-201ENST00000384362 110 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 MIR34B-201ENST00000385076 84 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 RPL19P1-201ENST00000411635 428 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 YPEL5P1-201ENST00000419731 367 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 RPL23AP30-201ENST00000432419 501 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 FCF1P1-201ENST00000432690 571 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 SNRPGP6-201ENST00000451124 220 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 RPS29P12-201ENST00000460178 152 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 RPS3AP14-201ENST00000483907 780 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 SCARNA24.1-201ENST00000516465 137 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 RNU6-506P-201ENST00000516553 94 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 AC090572.1-201ENST00000519251 160 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 FAM92A1P1-201ENST00000528023 890 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 RPL23AP78-201ENST00000599928 470 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 AP002826.1-201ENST00000608835 315 ntBASIC3.16□□□□□ -1.9
PACS1Q6VY07 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.16□□□□□ -1.9
PACS1Q6VY07 MIR6863-201ENST00000636112 90 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms