Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 H3F3AP1-201ENST00000559984 334 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AL606490.9-201ENST00000603331 271 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AL590392.1-201ENST00000604960 446 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 MTND4LP5-201ENST00000605152 292 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 SNORA51-201ENST00000606420 132 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 RMST_3.1-201ENST00000611651 109 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 MIR3653-201ENST00000625572 110 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AC008669.1-201ENST00000565823 2178 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 RNU6-1287P-201ENST00000362914 107 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 RN7SKP227-201ENST00000364445 330 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 RNU6-116P-201ENST00000384042 109 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 RNU6-1060P-201ENST00000384664 107 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AL139039.1-201ENST00000401900 692 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 RNU4-46P-201ENST00000410818 138 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AL157831.1-201ENST00000426134 473 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 HMGB1P9-201ENST00000429856 646 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AC007389.2-201ENST00000434630 306 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 SEPT14P3-201ENST00000439401 183 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AL732372.2-207ENST00000445840 183 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 MTATP6P7-201ENST00000453315 681 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 SEPT14P2-201ENST00000453405 183 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 RPL21P8-201ENST00000465083 535 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 MTCO3P38-201ENST00000468910 766 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AC069439.1-201ENST00000494739 167 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 RPS27AP10-201ENST00000496103 208 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AC026801.1-201ENST00000497178 464 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 CCDC34P1-201ENST00000507441 517 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 SEPT14P4-201ENST00000513445 186 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 RNU1-103P-201ENST00000516502 125 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 RNU7-143P-201ENST00000516781 65 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 FO082796.1-201ENST00000523795 183 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 SNORA59B-202ENST00000578183 701 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 MIR1273C-201ENST00000578669 77 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AL133393.1-201ENST00000603277 287 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AL355598.1-201ENST00000604169 202 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AL670379.4-201ENST00000605279 254 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AC104458.1-201ENST00000608243 463 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 uc_338.11-201ENST00000619132 160 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AL357559.1-201ENST00000622228 274 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 AC092628.2-201ENST00000622492 339 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 CEP170P1-201ENST00000502249 4587 ntBASIC3.81□□□□□ -1.8
PPP4R4Q6NUP7 RIOK3P1-201ENST00000418778 1528 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 ASNSP3-201ENST00000451989 1306 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 FRG1CP-201ENST00000358464 769 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 Y_RNA.453-201ENST00000384223 109 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 SNORA70C-201ENST00000384538 135 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 SNORA48.8-201ENST00000391324 134 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 RNU6-628P-201ENST00000410675 107 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 BPY2DP-201ENST00000422208 265 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AL158156.1-201ENST00000422509 473 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AL669831.1-202ENST00000428504 417 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AL139415.2-201ENST00000431968 163 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 GTF2IP13-201ENST00000438487 386 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC122718.1-201ENST00000439448 744 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 BRK1P2-201ENST00000442875 223 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC008264.1-201ENST00000447612 367 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AL360271.2-201ENST00000447710 161 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 FAM133DP-201ENST00000464802 691 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC091167.1-201ENST00000492017 396 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms