Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC034244.1-201ENST00000507687 207 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.56□□□□□ -2
ATL3Q6DD88 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.56□□□□□ -2
ATL3Q6DD88 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.56□□□□□ -2
ATL3Q6DD88 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.56□□□□□ -2
ATL3Q6DD88 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.56□□□□□ -2
ATL3Q6DD88 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.56□□□□□ -2
ATL3Q6DD88 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.56□□□□□ -2
ATL3Q6DD88 OR4R1P-201ENST00000529879 463 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.56□□□□□ -2
ATL3Q6DD88 AC010546.1-201ENST00000569391 485 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.56□□□□□ -2
ATL3Q6DD88 AL139344.1-201ENST00000605228 195 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 AC072039.2-201ENST00000608883 439 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 AC011890.2-201ENST00000613393 294 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 AC079395.3-201ENST00000615161 484 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ATL3Q6DD88 AP002782.1-201ENST00000623107 614 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 PCMTD1P7-201ENST00000634506 357 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.56□□□□□ -2
ATL3Q6DD88 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ATL3Q6DD88 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.56□□□□□ -2
ATL3Q6DD88 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ATL3Q6DD88 SNORA72.3-201ENST00000365074 132 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
ATL3Q6DD88 RNU2-33P-201ENST00000410344 192 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.55□□□□□ -2
ATL3Q6DD88 AC107081.1-201ENST00000414975 361 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.55□□□□□ -2
ATL3Q6DD88 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.55□□□□□ -2
ATL3Q6DD88 Z82209.1-201ENST00000422141 2135 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.55□□□□□ -2
ATL3Q6DD88 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.55□□□□□ -2
ATL3Q6DD88 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.55□□□□□ -2
ATL3Q6DD88 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.55□□□□□ -2
ATL3Q6DD88 FAM103A2P-201ENST00000444122 354 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 SNORA59A-201ENST00000459326 152 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.55□□□□□ -2
ATL3Q6DD88 AC034222.1-201ENST00000494052 532 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.55□□□□□ -2
ATL3Q6DD88 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.55□□□□□ -2
ATL3Q6DD88 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.55□□□□□ -2
ATL3Q6DD88 AC114786.4-201ENST00000508771 728 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 AC114797.1-201ENST00000514003 728 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 RNA5SP82-201ENST00000516707 92 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.55□□□□□ -2
ATL3Q6DD88 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.55□□□□□ -2
ATL3Q6DD88 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.55□□□□□ -2
ATL3Q6DD88 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.55□□□□□ -2
ATL3Q6DD88 AC009097.3-201ENST00000563557 1018 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 AC060771.1-201ENST00000582031 164 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 AC090616.3-201ENST00000582184 217 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 MIR544B-201ENST00000582372 78 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 AC011471.1-201ENST00000585766 187 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 AC025588.2-201ENST00000604851 466 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 AC107294.1-201ENST00000609524 467 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ATL3Q6DD88 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.55□□□□□ -2
ATL3Q6DD88 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ATL3Q6DD88 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ATL3Q6DD88 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.55□□□□□ -2
ATL3Q6DD88 CKAP2P1-201ENST00000555477 2049 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 SNORA68.1-201ENST00000364537 132 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 RNA5SP88-201ENST00000365560 109 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 RNU6-769P-201ENST00000384407 104 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 SNORA67.4-201ENST00000384688 142 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 AL109755.1-201ENST00000401791 649 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 AL513475.1-201ENST00000406602 315 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 AL513331.1-201ENST00000411908 397 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 HMGB1P11-201ENST00000413899 637 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.54□□□□□ -2
ATL3Q6DD88 AC009963.1-201ENST00000417265 157 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 ZNF863P-201ENST00000426746 417 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 AC009296.1-201ENST00000443146 155 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 WASF1P1-201ENST00000447560 1131 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.54□□□□□ -2
ATL3Q6DD88 LTV1P1-201ENST00000510683 1237 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.54□□□□□ -2
ATL3Q6DD88 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.54□□□□□ -2
ATL3Q6DD88 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.54□□□□□ -2
ATL3Q6DD88 MTCYBP20-201ENST00000524239 1129 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 AC087276.1-201ENST00000529659 480 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.54□□□□□ -2
ATL3Q6DD88 AC234778.2-201ENST00000566241 354 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 AP000676.3-201ENST00000623299 569 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.54□□□□□ -2
ATL3Q6DD88 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.54□□□□□ -2
ATL3Q6DD88 MTND1P37-201ENST00000636562 264 ntBASIC2.54□□□□□ -2
ATL3Q6DD88 CCT4P2-201ENST00000233836 1548 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
ATL3Q6DD88 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.53□□□□□ -2
ATL3Q6DD88 AC009487.4-201ENST00000624969 3585 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.53□□□□□ -2
ATL3Q6DD88 RNU6-1200P-201ENST00000384162 107 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 RPS4XP8-201ENST00000402039 771 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 AL359704.1-201ENST00000411586 781 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 AC005005.2-201ENST00000420779 380 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 MTND2P9-201ENST00000422293 931 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms