Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC004925.1-201ENST00000624256 2706 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AC009541.1-201ENST00000438279 2662 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 AC010300.1-201ENST00000600671 5134 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 RNU6-879P-201ENST00000364328 108 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 RNY1P5-201ENST00000383890 115 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 RNU6-1027P-201ENST00000383998 107 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 RNU6-166P-201ENST00000384371 107 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 MIR491-201ENST00000384877 84 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 RNU6-628P-201ENST00000410675 107 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 YME1L1P1-201ENST00000429435 297 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 ANP32BP2-201ENST00000454525 545 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 AC092798.1-201ENST00000458542 409 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 RNU6-346P-201ENST00000516288 111 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 AC006272.2-201ENST00000594725 163 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 BX005214.3-202ENST00000619809 325 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 U4.7-201ENST00000638126 106 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 SCARNA15-201ENST00000607520 4325 ntBASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF38BQ5VTL8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 AL731532.2-201ENST00000623542 1953 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 RNU6-81P-201ENST00000365608 104 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 RNU1-13P-201ENST00000384499 162 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 MIR200C-201ENST00000384980 68 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 PPIAP31-201ENST00000405422 495 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 Z85995.1-201ENST00000415547 335 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 RNF10P1-201ENST00000418589 369 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 AL358453.1-201ENST00000422522 250 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 RPS29P10-201ENST00000439197 166 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 snoU13.29-201ENST00000459370 104 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 Y_RNA.679-201ENST00000516416 91 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 SNORA31.20-201ENST00000517111 133 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 RNA5SP291-201ENST00000517222 105 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 AP004371.1-201ENST00000525240 214 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 AC025884.1-201ENST00000556034 378 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 AC006065.5-201ENST00000623427 349 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 AC239868.2-201ENST00000564237 4527 ntBASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.56□□□□□ -1.52
PRPF38BQ5VTL8 Z95114.1-201ENST00000624264 14574 ntBASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 RNU6-968P-201ENST00000384076 107 ntBASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 SNORD63-201ENST00000384262 68 ntBASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 MIR449B-201ENST00000384995 97 ntBASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 ADAM24P-201ENST00000398655 2101 ntBASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 NDUFB4P4-201ENST00000404822 243 ntBASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 AC009296.1-201ENST00000443146 155 ntBASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 AL353705.4-201ENST00000449661 238 ntBASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 RNU2-31P-201ENST00000516954 155 ntBASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 MIR3921-201ENST00000577308 85 ntBASIC5.55□□□□□ -1.52
PRPF38BQ5VTL8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms