Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RNFT1Q5M7Z0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 SNORA17.1-201ENST00000362945 126 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 RNU4-80P-201ENST00000363200 141 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 Y_RNA.116-201ENST00000363292 103 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-103P-201ENST00000363686 107 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 MIR585-201ENST00000384887 94 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 MIR153-2-201ENST00000385225 87 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 AL645733.1-201ENST00000402250 217 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 BTF3P11-201ENST00000426582 477 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 MTCO1P44-201ENST00000441935 243 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 RPS11P7-201ENST00000442125 465 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 RN7SL97P-201ENST00000486780 299 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 RPL23AP75-201ENST00000491601 451 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 AC006499.6-201ENST00000511169 607 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 RN7SKP164-201ENST00000516138 266 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 RN7SKP66-201ENST00000516681 231 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-143P-201ENST00000516942 93 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 AC100767.1-201ENST00000528178 123 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 MIR4646-201ENST00000580775 63 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 MIR4744-201ENST00000581563 82 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 NF1P5-201ENST00000588287 448 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 Mico1.1-201ENST00000611698 204 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 AP002799.1-201ENST00000623552 423 ntBASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.83□□□□□ -1.64
RNFT1Q5M7Z0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AC006206.1-201ENST00000544842 3387 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 RN7SKP224-201ENST00000364140 325 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 Y_RNA.525-201ENST00000384570 113 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 MIR105-1-201ENST00000385222 81 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 UBA52P6-201ENST00000399822 382 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AC093162.1-201ENST00000419682 124 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 COX6B1P7-201ENST00000430845 235 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AL121594.1-201ENST00000475906 575 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 RNA5SP165-201ENST00000517142 115 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AC008489.1-201ENST00000524271 483 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 MIR4436B2-201ENST00000581415 91 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 MIR4436B1-201ENST00000583272 91 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AL354798.1-201ENST00000622505 329 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AC005005.4-201ENST00000623789 16698 ntBASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNFT1Q5M7Z0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AC114774.1-201ENST00000507410 1770 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms